Gene

col28a2a

ID
ZDB-GENE-030131-4444
Name
collagen, type XXVIII, alpha 2a
Symbol
col28a2a Nomenclature History
Previous Names
  • si:dkey-211m23.2
  • wu:fd06c09 (1)
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to be an extracellular matrix structural constituent. Predicted to be involved in extracellular matrix organization. Predicted to localize to extracellular matrix and extracellular space. Is expressed in floor plate; integument; muscle; rhombomere 5; and white matter. Orthologous to human COL28A1 (collagen type XXVIII alpha 1 chain).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With col28a2a Human Ortholog
No data available
Associated With col28a2a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020901 Proteinase inhibitor I2, Kunitz, conserved site
Domain IPR002035 von Willebrand factor, type A
Domain IPR002223 Pancreatic trypsin inhibitor Kunitz domain
Homologous_superfamily IPR036465 von Willebrand factor A-like domain superfamily
Homologous_superfamily IPR036880 Pancreatic trypsin inhibitor Kunitz domain superfamily
Repeat IPR008160 Collagen triple helix repeat
Domain Details Per Protein
Protein Length Collagen triple helix repeat Pancreatic trypsin inhibitor Kunitz domain Pancreatic trypsin inhibitor Kunitz domain superfamily Proteinase inhibitor I2, Kunitz, conserved site von Willebrand factor A-like domain superfamily von Willebrand factor, type A
UniProtKB:C3KEZ4 1208
UniProtKB:F1QAB3 1208
UniProtKB:E9QEM2 67
UniProtKB:E9QEJ2 1192
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-col28a2a Rabbit
  • IHC
  • WB
1
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations