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ZIRC
ZFIN ID: ZDB-GENE-030131-3782
Gene Name: CTR9 homolog, Paf1/RNA polymerase II complex component
Gene Symbol: ctr9
Sequence Ontology ID : SO:0000704

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Previous Names: fc54a06, wu:fc54a06

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA polymerase II complex binding activity. Involved in animal organ development; pigmentation; and somitogenesis. Localizes to the Cdc73/Paf1 complex. Orthologous to human CTR9  ...
GENE EXPRESSION
All Expression Data: 2 figures from Langenbacher et al., 2011
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la961 Point Mutation Unknown Premature Stop ENU
sa12664 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21125 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zy13 Point Mutation Unknown Premature Stop ENU
    Targeting reagents:
    DISEASE ASSOCIATED WITH ctr9 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ctr9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process heart development (more)
    Cellular Component Cdc73/Paf1 complex (more)
    Molecular Function RNA polymerase II complex binding (more)
    GO Terms (all 10)
    TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ctr9 No data available
    MARKER RELATIONSHIPS
    ctr9Encodes: [EST] fc54a06
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001083583 (1) 3873bp
    Genomic GenBank:CU467652 (1) 94520bp
    Select Tool
    Polypeptide UniProtKB:A3KDM3 (1) 1160aa
    Sequence Clusters UniGene:20716 (1)
    Sequence Information (all 10)
    ORTHOLOGY for ctr9 (Chr: 7)
    CITATIONS (20)