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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-2805
Gene Name: podocalyxin-like
Gene Symbol: podxl
Sequence Ontology ID : SO:0000704

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Previous Names: fc18d02, si:dkey-146n1.1, wu:fc18d02

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in pronephric glomerulus morphogenesis. Predicted to localize to the apical plasma membrane and microvillus membrane. Orthologous to human PODXL (podocalyxin like).
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH podxl HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH podxl VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process pronephric glomerulus morphogenesis (more)
Cellular Component cell projection (more)
GO Terms (all 13)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013836 (1)
  • InterPro:IPR017403 (1)
  • Pfam:PF06365 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA podxl-201 (1) 4160
    podxl-202 (1) 766
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    MARKER RELATIONSHIPS
    podxlContained in: [BAC] DKEY-146N1 (1) (order this)
    podxlEncodes: [EST] eu1088 (1), fc18d02
    [cDNA] MGC:158122 (1) (order this), MGC:195019 (1) (order this), MGC:195035 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001045016 (1) 4227bp
    Genomic GenBank:BX465862 (1) 214562bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5RHU2 (1) 445aa
    Sequence Clusters UniGene:78276 (1)
    Sequence Information (all 27)
    ORTHOLOGY for podxl (Chr: 4)
    CITATIONS (33)