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ZIRC
ZFIN ID: ZDB-GENE-030131-1531
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Gene Name: ATPase H+ transporting V0 subunit d1
Gene Symbol: atp6v0d1
Sequence Ontology ID : SO:0001217

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Previous Names: cto, fb73h07, wu:fb73h07, zgc:63769

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have proton-exporting ATPase activity, phosphorylative mechanism and proton-transporting ATPase activity, rotational mechanism. Involved in several processes, including animal organ  ...
GENE EXPRESSION
All Expression Data: 12 figures from 6 publications
Directly Submitted Expression Data: 6 figures (8 images) from Thisse et al., 2004 [MGC:63769]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
gw325 Point Mutation Unknown Premature Stop ENU
hi2188bTg Transgenic Insertion Intron 6 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la026014Tg Transgenic Insertion Unknown Unknown DNA
    sa34121 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents:
    PHENOTYPE
    Data: 15 figures from 7 publications
    Observed in:
    DISEASE ASSOCIATED WITH atp6v0d1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atp6v0d1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process heart looping (more)
    Cellular Component COLOCALIZES_WITH   centrosome (more)
    Molecular Function proton transmembrane transporter activity (more)
    GO Terms (all 27)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002843 (1)
  • InterPro:IPR016727 (1)
  • InterPro:IPR035067 (1)
  • InterPro:IPR036079 (1)
  • Pfam:PF01992 (1)
    • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp6v0d1-201 (1) 2145
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atp6v0d1 No data available
    MARKER RELATIONSHIPS
    atp6v0d1 Contained in: [BAC] DKEY-193L8 (1) (order this)
    atp6v0d1 Encodes: [EST] fb73h07
    [cDNA] MGC:63769 (1) (order this), MGC:174003 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199620 (1) 2134 bp
    Select Tool
    Genomic GenBank:CR356247 (1) 211785 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q6PGV1 (1) 350 aa
    Select Tool
    Sequence Clusters UniGene:77332 (1)
    Sequence Information (all 20)
    OTHER atp6v0d1 GENE PAGES
  • Alliance (1)
  • Gene:322811 (1)
  • VEGA:OTTDARG00000020236 (1)
  • Ensembl(GRCz11):ENSDARG00000069090 (1)
    • ORTHOLOGY for atp6v0d1 ( Chr: 7 )
    CITATIONS (42)