Gene

ddx55

ID
ZDB-GENE-021212-1
Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Symbol
ddx55 Nomenclature History
Previous Names
  • chunp6861
  • fc32a12
  • kiaa1595 (1)
  • wu:fc32a12 (1)
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Description
Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and ATP-dependent activity, acting on DNA. Predicted to be active in nucleolus. Orthologous to human DDX55 (DEAD-box helicase 55).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
hi215TgTransgenic insertionIntron 3UnknownDNA
sa17029Allele with one point mutationUnknownSplice SiteENU
sa34815Allele with one point mutationUnknownPremature StopENU
sa41575Allele with one point mutationUnknownPremature StopENU
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Sequence Targeting Reagents
No data available
Human Disease
Associated With ddx55 Human Ortholog
No data available
Associated With ddx55 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site
Domain IPR001650 Helicase, C-terminal domain-like
Domain IPR011545 DEAD/DEAH box helicase domain
Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
Domain IPR014014 RNA helicase, DEAD-box type, Q motif
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Domain Details Per Protein
Protein Length ATP-dependent RNA helicase DEAD-box, conserved site ATP-dependent rRNA helicase SPB4-like, C-terminal extension DEAD/DEAH box helicase domain Helicase, C-terminal domain-like Helicase superfamily 1/2, ATP-binding domain P-loop containing nucleoside triphosphate hydrolase RNA helicase, DEAD-box type, Q motif
UniProtKB:Q8JHJ2 593
UniProtKB:F1QZG8 593
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 10
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ddx55-201 (1) Ensembl 2,180 nt
ncRNA ddx55-002 (1) Ensembl 700 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-149O12ZFIN Curated Data
EncodesESTfc32a12ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanDDX5512
Conserved genome location (synteny) (1)
Nucleotide sequence comparison (1)
Citations