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ZIRC
ZFIN ID: ZDB-GENE-021115-9
Gene Name: Kruppel-like factor 6a
Gene Symbol: klf6a
Sequence Ontology ID : SO:0000704

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Previous Names: klf6, cb538 (1), copeb, wu:fb76d04 (1), wu:fb92h03 (1), wu:fe26g06 (1), wu:fk78f12 (1)

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific; chromatin binding activity; and enhancer sequence-specific DNA binding activity. Involved in several processes,  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ioz102 Small Deletion Exon 1 Premature Stop CRISPR
sa6755 Point Mutation Unknown Splice Site ENU
sa32473 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH klf6a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    prostate cancer Prostate cancer, somatic 176807
    stomach cancer Gastric cancer, somatic 613659
    DISEASE ASSOCIATED WITH klf6a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process optic nerve formation (more)
    Cellular Component chromatin (more)
    Molecular Function chromatin binding (more)
    GO Terms (all 17)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA klf6a-202 (1) 3369
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM klf6a No data available
    MARKER RELATIONSHIPS
    klf6aContained in: [BAC] CH73-36I7 (1) (order this)
    klf6aEncodes: [EST] cb538 (1) (order this), fb76d04, fb92h03, fe26g06, fk78f12
    [cDNA] MGC:55837 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201461 (1) 3046bp
    Genomic GenBank:CR376788 (1) 188521bp
    Select Tool
    Polypeptide UniProtKB:F1R7F0 (1) 283aa
    Sequence Clusters UniGene:77265 (1)
    Sequence Information (all 23)
    ORTHOLOGY for klf6a (Chr: 24)
    CITATIONS (31)