Gene

copa

ID
ZDB-GENE-020905-2
Name
COPI coat complex subunit alpha
Symbol
copa Nomenclature History
Previous Names
  • cb281 (1)
  • fb13c12
  • sneezy
  • wu:fb13c12
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Predicted to have structural molecule activity. Involved in notochord development and somite development. Predicted to localize to COPI vesicle coat. Is expressed in several structures, including axis; hatching gland; mesoderm; notochord; and pectoral fin. Orthologous to human COPA (COPI coat complex subunit alpha).
Genome Resources
Note
None
Expression
All Expression Data
10 figures from 5 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
22 figures from 7 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With copa Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
{Autoimmune interstitial lung, joint, and kidney disease} 616414
Associated With copa Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019775 WD40 repeat, conserved site
Domain IPR006692 Coatomer, WD associated region
Domain IPR010714 Coatomer, alpha subunit, C-terminal
Domain IPR017986 WD40-repeat-containing domain
Family IPR016391 Coatomer alpha subunit
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036322 WD40-repeat-containing domain superfamily
Repeat IPR001680 WD40 repeat
Repeat IPR020472 G-protein beta WD-40 repeat
Domain Details Per Protein
Protein Length Coatomer alpha subunit Coatomer, alpha subunit, C-terminal Coatomer, WD associated region G-protein beta WD-40 repeat WD40 repeat WD40 repeat, conserved site WD40-repeat-containing domain WD40-repeat-containing domain superfamily WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:B3DGP8 1224
UniProtKB:A7E2H7 538
UniProtKB:Q6JWU9 1226
UniProtKB:F1QDQ1 1224
UniProtKB:A0A286Y8Z3 538
UniProtKB:Q6DRK5 1224
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Gene Tree
Ensembl
Citations