Transcript

copa-004

ID

ZDB-TSCRIPT-090929-7571

Name

copa-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

copa (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000111382 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000111382.4|gene_biotype:protein_coding|ENSDARG00000004173.13 transcript_biotype:processed_transcript cdna chromosome:GRCz11:2:37192441:37201587:1
CCATCATGATCTGCAACAAGAAGTTAGAGAGTCTCTGCAA
CATCCATGAGAACATCCGGGTGAAGAGTGGAGCCTGGGCT
GAGAATGAAGTCTTCATCTACACCACCTCCAACCATATCA
AATATGCTCTGACTTCTGGCGATCATGGTATAATCCGTAC
ATTGGATCTGCCCATCTATGTGACAAGAGTGAGGGGTAAC
AGTGTTTATTGCCTGGATCGGGAGTGCAGACCACGTGTGC
CAGAGGTGGACCCCAACGCTCAACTGCTGCAGCCTCCACC
TCCCATCAACCCTCTGGACACAAACTGGCCTTTGCTCACA
GTCTCCAAGGGCTTCTTTGAGGGAGCTATCGCTGCCAAAG
GACGAGCAGGGCAGATGGTTGCTGATCTGGACATGGATGC
TCCAGGAGGAGAAGGGTGGGGAGAAGATGCAGAACTTCAT
TTGGATGAAGACGGCTTCATGGATGCTCAGGAGGGACTGG
GTGATGAGGGAGCCATTGGGAAAGACGACGGAGGAGGCTG
GGATGTTGAAGAAGATCTGGATCTCCCACCAGAGCTGGAC
GTACCTTCTGTTGGTGGAGGTGGCGCAGAGGGTGAAGGCT
TCTTTGTGCCACCCACTAAGGGCACAAGCCCAACCCAGAT
GTGGTGCAACAACTCTCAGCTGTCAGTGGATCACATACTG
GCTGGCTCTTTTGAGACTGCTATGAGGTTGCTACATGACC
AGGTTGGCGTTGTTCAGTTTGGGCCGTATAAGCAGCTCTT
CATGCAGACTTTGTCCCGCGGCCG

OTTDART00000024761 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000024761|OTTDARG00000019960|ZDB-GENE-020905-2 copa|no_translation copa-004 LG_ BX649372.5 Danio rerio protein_coding KNOWN, 784 bp
CCATCATGATCTGCAACAAGAAGTTAGAGAGTCTCTGCAA
CATCCATGAGAACATCCGGGTGAAGAGTGGAGCCTGGGCT
GAGAATGAAGTCTTCATCTACACCACCTCCAACCATATCA
AATATGCTCTGACTTCTGGCGATCATGGTATAATCCGTAC
ATTGGATCTGCCCATCTATGTGACAAGAGTGAGGGGTAAC
AGTGTTTATTGCCTGGATCGGGAGTGCAGACCACGTGTGC
CAGAGGTGGACCCCAACGCTCAACTGCTGCAGCCTCCACC
TCCCATCAACCCTCTGGACACAAACTGGCCTTTGCTCACA
GTCTCCAAGGGCTTCTTTGAGGGAGCTATCGCTGCCAAAG
GACGAGCAGGGCAGATGGTTGCTGATCTGGACATGGATGC
TCCAGGAGGAGAAGGGTGGGGAGAAGATGCAGAACTTCAT
TTGGATGAAGACGGCTTCATGGATGCTCAGGAGGGACTGG
GTGATGAGGGAGCCATTGGGAAAGACGACGGAGGAGGCTG
GGATGTTGAAGAAGATCTGGATCTCCCACCAGAGCTGGAC
GTACCTTCTGTTGGTGGAGGTGGCGCAGAGGGTGAAGGCT
TCTTTGTGCCACCCACTAAGGGCACAAGCCCAACCCAGAT
GTGGTGCAACAACTCTCAGCTGTCAGTGGATCACATACTG
GCTGGCTCTTTTGAGACTGCTATGAGGTTGCTACATGACC
AGGTTGGCGTTGTTCAGTTTGGGCCGTATAAGCAGCTCTT
CATGCAGACTTTGTCCCGCGGCCG

Related Transcripts

Transcripts related to copa

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	copa-201 (1) Ensembl	Ensembl	4,131 nt	Select Tool ZFIN BLAST
mRNA	copa-205 (1) Ensembl	Ensembl	2,062 nt	Select Tool ZFIN BLAST
ncRNA	copa-002 (1) Ensembl	Ensembl	717 nt	Select Tool ZFIN BLAST
ncRNA	copa-003 (1) Ensembl	Ensembl	791 nt	Select Tool ZFIN BLAST
ncRNA	copa-004	Ensembl	784 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations