Gene

ptprsa

ID

ZDB-GENE-020107-3

Name

protein tyrosine phosphatase receptor type Sa

Symbol

ptprsa Nomenclature History

Previous Names

ptprs
RPTP[s] (1)
zf-RPTP[s] (1)

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to enable protein tyrosine phosphatase activity. Acts upstream of or within olfactory bulb development. Predicted to be located in plasma membrane. Is expressed in head and nervous system. Orthologous to human PTPRS (protein tyrosine phosphatase receptor type S).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from 3 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ptprsa Human Ortholog

No data available

Associated With ptprsa Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Active_site	IPR016130	Protein-tyrosine phosphatase, active site
Domain	IPR000242	Tyrosine-specific protein phosphatase, PTPase domain
Domain	IPR000387	Tyrosine-specific protein phosphatases domain
Domain	IPR003595	Protein-tyrosine phosphatase, catalytic
Domain	IPR003598	Immunoglobulin subtype 2
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR003961	Fibronectin type III
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR013098	Immunoglobulin I-set
Family	IPR050713	Receptor-type Tyrosine-protein Phosphatases/Ushers
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR029021	Protein-tyrosine phosphatase-like
Homologous_superfamily	IPR036116	Fibronectin type III superfamily
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M9PJZ6	InterPro	1520
UniProtKB:A0A8M9PJY7	InterPro	1928
UniProtKB:A0A8M9PS80	InterPro	1920
UniProtKB:A0A8M9PVP8	InterPro	1936
UniProtKB:A0A8M9P4I5	InterPro	1944
UniProtKB:A0A8M9P4K6	InterPro	1498
UniProtKB:A0A8M9PE92	InterPro	1928
UniProtKB:A0A8M9P4J6	InterPro	1923
UniProtKB:A0A8M9PJX4	InterPro	1945
UniProtKB:A0A8M9PVQ7	InterPro	1533
UniProtKB:A0A8M9P4J3	InterPro	1929
UniProtKB:A0A8M9PJY3	InterPro	1936
UniProtKB:A0A8M9PS75	InterPro	1530
UniProtKB:A0A8M9PVR5	InterPro	1506
UniProtKB:A0A8M9PS86	InterPro	1518
UniProtKB:A0A8M9PK04	InterPro	1512
UniProtKB:A0A8M9PEA7	InterPro	1916
UniProtKB:A0A8M9PVR1	InterPro	1905
UniProtKB:A0A8M9PVP4	InterPro	1942
UniProtKB:A0A8M9PK00	InterPro	1502
UniProtKB:A0A8M9P4K2	InterPro	1901
UniProtKB:A0A8M9PE85	InterPro	1943
UniProtKB:A0A8M9P4J0	InterPro	1940
UniProtKB:A0A8M9PE98	InterPro	1923
UniProtKB:A0A8M9PS70	InterPro	1924
UniProtKB:A0A8M9P4J8	InterPro	1529
UniProtKB:A0A8M9PVQ3	InterPro	1927
UniProtKB:A0A8M9PEB3	InterPro	1513
UniProtKB:A0A8M9PEA2	InterPro	1524
UniProtKB:A0A8M9PS58	InterPro	1941
UniProtKB:A0A8M9PJZ1	InterPro	1831
UniProtKB:A0A8M9PS56	InterPro	1944
UniProtKB:A0A8M9PE90	InterPro	1939
UniProtKB:A0A8M9PS65	InterPro	1932
UniProtKB:A0A8M9PJX8	InterPro	1942

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ptprsa-201 (1) Ensembl	Ensembl	5,842 nt	Select Tool ZFIN BLAST
mRNA	ptprsa-202 (1) Ensembl	Ensembl	508 nt	Select Tool ZFIN BLAST
mRNA	ptprsa-203 (1) Ensembl	Ensembl	6,210 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations