ZFIN ID: ZDB-GENE-011213-1
Gene Name: hairy-related 9
Gene Symbol: her9
Sequence Ontology ID : SO:0000704

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Previous Names: Hes1a (1), wu:fc30a03 (1), zgc:100766

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have several functions, including RNA polymerase II regulatory region sequence-specific DNA binding activity, negative regulation of biological process, and transcription factor binding  ...
GENE EXPRESSION
All Expression Data: 34 figures from 17 publications
Wild-type Stages, Structures: Gastrula:Shield (6.0h-8.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011036Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43978 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH her9 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH her9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative regulation of neurogenesis (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003650 (1)
  • InterPro:IPR011598 (1)
  • InterPro:IPR036638 (1)
  • PROSITE:PS50888 (1)
  • PROSITE:PS51054 (1)
  • Pfam:PF00010 (1)
  • Pfam:PF07527 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA her9-002 (1) 854
    mRNA her9-201 (1) 1461
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM her9 No data available
    MARKER RELATIONSHIPS
    her9Contained in: [BAC] DKEY-27M6 (1) (order this)
    her9Encodes: [EST] fc30a03 (1)
    [cDNA] MGC:100766 (1) (order this), MGC:174858 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131873 (1) 1448bp
    Genomic GenBank:CR751236 (1) 108342bp
    Select Tool
    Polypeptide UniProtKB:A7MCR9 (1) 291aa
    Sequence Clusters UniGene:78757 (1)
    Sequence Information (all 25)
    OTHER her9 GENE PAGES
  • Alliance (1)
  • Gene:140613 (1)
  • VEGA:OTTDARG00000021294 (1)
  • ORTHOLOGY for her9 (Chr: 23)
    CITATIONS (68)