ZFIN ID: ZDB-GENE-011212-3
Gene Name: vimentin
Gene Symbol: vim    Nomenclature History

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Previous Name: cb28 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Involved in wound healing. Predicted to localize to intermediate filament. Is expressed in several structures, including axis; integument; midbrain neural keel; nervous system; and neural tube. Human ortholog(s) of this gene implicated in Behcet's disease; atherosclerosis; autoimmune hypersensitivity disease (multiple); cataract 30; and rheumatoid arthritis. Orthologous to human VIM (vimentin).
Genome Resources: Alliance (1),  Gene:140599 (1),  Ensembl(GRCz11):ENSDARG00000010008 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
CRISPR1-vim
1
MO1-vim N/A 1
MO2-vim N/A 1
DISEASE ASSOCIATED WITH vim HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
cataract 30 Alliance Cataract 30, pulverulent 116300
DISEASE ASSOCIATED WITH vim VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process wound healing (more)
Cellular Component intermediate filament (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA vim-201 (1)    Ensembl 1861
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES
Name Type Isotype Host Organism Assay Source Publications
Ab1-vim monoclonal IgG1 Mouse IHC, WB Sigma-Aldrich
Millipore
Dako North America, Inc.
Abcam plc
Novus Biologicals, LLC
Vector Laboratories
10
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM vim
Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
Tg(-2vim:EGFP) vim EGFP Danio rerio 1 3
MARKER RELATIONSHIPS
vim Contained in: [BAC] CH73-48E2 (1), CH211-266I10 (1)
vim Encodes: [EST] cb28 (1) (order this)
[cDNA] MGC:63857 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_131872 (1) 1824 nt
Genomic GenBank:CU207275 (1) 165971 nt
Select Tool
Polypeptide UniProtKB:F1QAM8 (1) 455 aa
Sequence Information (all 17)
ORTHOLOGY for vim ( Chr: 24 )
CITATIONS (51)