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ZIRC
ZFIN ID: ZDB-GENE-011210-2
Gene Name: X-box binding protein 1
Gene Symbol: xbp1
Sequence Ontology ID : SO:0000704

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Previous Names: cb918 (1), id:ibd1195, trebf (1), wu:fb02h05 (1), wu:fb63f10 (1)

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in gland development; hatching; and transcription by RNA polymerase II. Predicted to localize to the integral  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la024815Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40380 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH xbp1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    {Major affective disorder-7, susceptibility to} 612371
    DISEASE ASSOCIATED WITH xbp1 VIA EXPERIMENTAL MODELS No data available
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004827 (1)
  • PROSITE:PS00036 (1)
  • PROSITE:PS50217 (1)
  • Pfam:PF07716 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA xbp1-003 (1) 813
    aberrant processed transcript xbp1-202 (1) 2135
    mRNA xbp1-203 (1) 1728
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    MARKER RELATIONSHIPS
    xbp1Contained in: [BAC] CH211-201F12 (order this), DKEY-119P2 (1) (order this)
    xbp1Encodes: [EST] cb918 (1), fb02h05 (1), ibd1195 (order this)
    [cDNA] MGC:55240 (1) (order this), MGC:55241 (1) (order this), MGC:76840 (1) (order this), MGC:173917 (1) (order this), MGC:191954 (1) (order this)
    xbp1Is Hybridized by: [EST] fb63f10
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131874 (1) 1769bp
    Genomic GenBank:BX640473 193735bp
    Select Tool
    Polypeptide UniProtKB:A7MCI6 (1) 383aa
    Sequence Clusters UniGene:76130 (1)
    Sequence Information (all 54)
    ORTHOLOGY for xbp1 (Chr: 5)
    CITATIONS (82)