Gene

jag1b

ID

ZDB-GENE-011128-4

Name

jagged canonical Notch ligand 1b

Symbol

jag1b Nomenclature History

Previous Names

jag3
jagged1b
kmi (1)
puc
unp1069

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Predicted to have Notch binding activity. Involved in several processes, including animal organ development; face morphogenesis; and fin regeneration. Predicted to localize to plasma membrane. Human ortholog(s) of this gene implicated in Alagille syndrome; congenital heart disease; multiple sclerosis; and tetralogy of Fallot. Is expressed in several structures, including digestive system; endocrine system; nervous system; otic vesicle; and pharyngeal arch. Orthologous to human JAG1 (jagged canonical Notch ligand 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

37 figures from 33 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 26 figures from 12 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With jag1b Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
Alagille syndrome	Alliance	Alagille syndrome 1	118450
tetralogy of Fallot	Alliance	Tetralogy of Fallot	187500
		Charcot-Marie-Tooth disease, axonal, type 2HH	619574
		?Deafness, congenital heart defects, and posterior embryotoxon	617992

Associated With jag1b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR013032	EGF-like, conserved site
Conserved_site	IPR018097	EGF-like calcium-binding, conserved site
Domain	IPR000742	EGF-like domain
Domain	IPR001007	VWFC domain
Domain	IPR001774	Delta/Serrate/lag-2 (DSL) protein
Domain	IPR001881	EGF-like calcium-binding domain
Domain	IPR011651	Notch ligand, N-terminal domain
Domain	IPR049883	NOTCH1 EGF-like calcium-binding domain
Family	IPR026219	Jagged/Serrate protein
Family	IPR050906	Notch signaling pathway
Homologous_superfamily	IPR009030	Growth factor receptor cysteine-rich domain superfamily
PTM	IPR000152	EGF-type aspartate/asparagine hydroxylation site