ZFIN is now using GRCz12tu for Genomic Data
Gene
ncam1b
- ID
- ZDB-GENE-010822-2
- Name
- neural cell adhesion molecule 1b
- Symbol
- ncam1b Nomenclature History
- Previous Names
-
- ncam3
- zPCAM (1)
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within axon guidance. Predicted to be located in plasma membrane. Predicted to be active in neuron projection. Is expressed in nervous system; otic vesicle; posterior neural keel; spinal cord neural rod; and spinal cord neural tube. Human ortholog(s) of this gene implicated in several diseases, including alcohol dependence; bipolar disorder; drug dependence; middle cerebral artery infarction; and nicotine dependence. Orthologous to human NCAM1 (neural cell adhesion molecule 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 18 figures from 7 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cssl:d097 (19 images)
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Langhauser et al., 2012
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003598 | Immunoglobulin subtype 2 |
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR003961 | Fibronectin type III |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013098 | Immunoglobulin I-set |
| Family | IPR009138 | Neural cell adhesion |
| Family | IPR050958 | Cell Adhesion and Cytoskeletal Organization |
| Family | IPR051170 | Neural and epithelial cell adhesion domain-containing protein |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ncam1b-201
(1)
|
Ensembl | 3,738 nt | ||
| mRNA |
ncam1b-202
(1)
|
Ensembl | 961 nt | ||
| mRNA |
ncam1b-203
(1)
|
Ensembl | 3,738 nt | ||
| mRNA |
ncam1b-204
(1)
|
Ensembl | 812 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-ncam1b | polyclonal | Rabbit |
|
2 |
Plasmids
No data available
- Genome Browsers