Gene

celf1

ID
ZDB-GENE-000501-1
Name
cugbp, Elav-like family member 1
Symbol
celf1 Nomenclature History
Previous Names
  • brul (1)
  • Bruno-like (1)
  • cb920 (1)
  • cugbp1
  • im:7151366 (1)
  • si:dkey-30l20.6
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Enables mRNA 3'-UTR binding activity. Involved in cell migration; liver development; and pancreas morphogenesis. Acts upstream of or within several processes, including embryonic liver development; endodermal digestive tract morphogenesis; and positive regulation of mRNA catabolic process. Located in pole plasm. Is expressed in several structures, including eye; gonad; lens placode; pectoral fin; and solid lens vesicle. Orthologous to human CELF1 (CUGBP Elav-like family member 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
21 figures from 11 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
13 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With celf1 Human Ortholog
No data available
Associated With celf1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR034196 CELF1/2, RNA recognition motif 1
Domain IPR034198 CELF1/2, RNA recognition motif 2
Domain IPR034199 CELF1/2, RNA recognition motif 3
Family IPR002343 Paraneoplastic encephalomyelitis antigen
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Additional Resources Length CELF1/2, RNA recognition motif 1 CELF1/2, RNA recognition motif 2 CELF1/2, RNA recognition motif 3 Nucleotide-binding alpha-beta plait domain superfamily Paraneoplastic encephalomyelitis antigen RNA-binding domain superfamily RNA recognition motif domain
UniProtKB:A0A8M9Q1S9 InterPro 511
UniProtKB:A0A8M3B493 InterPro 508
UniProtKB:A0A8M2BGC2 InterPro 522
UniProtKB:A0A8M3AUE5 InterPro 530
UniProtKB:A0A8M3B1C7 InterPro 507
UniProtKB:A0A8M2BGA2 InterPro 535
UniProtKB:A0A8M2BGA1 InterPro 539
UniProtKB:A0A8M3B1C3 InterPro 542
UniProtKB:Q9IBD0 InterPro 501
UniProtKB:A0A8M2BGA3 InterPro 518
UniProtKB:A0A8M3AUE9 InterPro 504
UniProtKB:A0A8M3AUD4 InterPro 526
UniProtKB:A0A8M2BGX4 InterPro 519
UniProtKB:A0A8M2BGB8 InterPro 523
UniProtKB:A0A8M9QH64 InterPro 535
UniProtKB:A0A8M9PP42 InterPro 512
UniProtKB:A0A8M3BB44 InterPro 545
UniProtKB:A0A8M3B487 InterPro 545
UniProtKB:A0A8M3AUE0 InterPro 546
UniProtKB:A0A8M3BB48 InterPro 529
UniProtKB:A0AB32TRT3 InterPro 535
UniProtKB:A0AB32TRT9 InterPro 495
UniProtKB:A0AB32TRV0 InterPro 496
UniProtKB:A0AB32TSP3 InterPro 480
UniProtKB:A0AB32TT51 InterPro 480
UniProtKB:A0AB32TUA7 InterPro 517
UniProtKB:A0AB32TV59 InterPro 534
UniProtKB:A0AB32TV74 InterPro 485
UniProtKB:A0AB32TV99 InterPro 508
UniProtKB:A0AB32TWZ4 InterPro 533
UniProtKB:A0AB32TWZ7 InterPro 507
UniProtKB:A0AB32TX07 InterPro 481
UniProtKB:A0AB32TXI2 InterPro 538
UniProtKB:A0AB32TXK5 InterPro 497
UniProtKB:A0AB32TYL7 InterPro 538
UniProtKB:A0AB32TYN2 InterPro 496
UniProtKB:A0AB32TYQ9 InterPro 518
UniProtKB:A0AB32TYS2 InterPro 541
UniProtKB:A0AB32TYT8 InterPro 503
UniProtKB:A0AB32TZV3 InterPro 541
UniProtKB:A0AB32TZW7 InterPro 500
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA celf1-201 (1) Ensembl 2,778 nt
mRNA celf1-202 (1) Ensembl 3,709 nt
mRNA celf1-203 (1) Ensembl 827 nt
mRNA celf1-204 (1) Ensembl 779 nt
ncRNA si:dkey-30l20.6-001 (1) Ensembl 1,128 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-cugbp1 polyclonal Rabbit
2
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations