ZFIN ID: ZDB-GENE-000323-1
Gene Name: T-box, brain, 1b
Gene Symbol: tbr1b
Sequence Ontology ID : SO:0000704

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Previous Names: tbr1, zf-tbr1 (1)

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 20 figures from 13 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2005 [eu258]
Wild-type Stages, Structures: Gastrula:Shield (6.0h-8.0h) to Adult (90d-730d, breeding adult)
  brain, diencephalon, dorsal telencephalon, inner ear (all 13) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb24 Small Deletion Unknown Unknown TALEN
  • China Zebrafish Resource Center (CZRC) (order this)
  • ihb26 Small Deletion Unknown Unknown TALEN
  • China Zebrafish Resource Center (CZRC) (order this)
  • sa10845 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34772 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa41554 Point Mutation Unknown Splice Site ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tbr1b HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001699
  • InterPro:IPR008967
  • InterPro:IPR018186
  • InterPro:IPR032385
  • PROSITE:PS01264
  • PROSITE:PS01283
  • PROSITE:PS50252
  • Pfam:PF00907
  • Pfam:PF16176
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tbr1b-001 (1) 3855
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tbr1b
    Tg(tbr1:EYFP)
    MARKER RELATIONSHIPS
    tbr1bContained in: [Fosmid] CH1073-192A6 (1) (order this)
    tbr1bEncodes: [EST] eu258 (1)
    [cDNA] MGC:175170 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001115090 (1) 3855bp
    Genomic GenBank:CU651665 (1) 37255bp
    Select Tool
    Polypeptide UniProtKB:B5DE34 676aa
    Sequence Clusters UniGene:10723 (1)
    Sequence Information (all 17)
    OTHER tbr1b GENE PAGES
  • Gene:58042 (1)
  • VEGA:OTTDARG00000034010 (1)
  • Ensembl(GRCz10):ENSDARG00000004712 (1)
  • ORTHOLOGY for tbr1b (Chr: 9)
    CITATIONS (43)