FIGURE

Fig. S4

ID
ZDB-FIG-190606-30
Publication
Giovannucci et al., 2019 - CaImAn an open source tool for scalable calcium imaging data analysis
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Fig. S4

Tracking neurons across days; step-by-step description of multi session registration.

(a) Correlation image overlaid to contour plots of the neurons identified by in day 1 (top, 453 neurons), 2 (middle, 393 neurons) and 3 (bottom, 375 neurons). (b) Result of the pairwise registration between session 1 and 2. The union of distinct active components consists of the components that were active in i) both sessions (yellow - where only the components of session two are displayed), ii) only in session 2 (green), and iii) only in session 1 (red), aligned to the FOV of session 2. (c) At the next step the union of sessions 1 and 2 is registered with the results of session three to produce the union of all distinct components aligned to the FOV of session 3. (d) Registration of non-consecutive sessions (session 1 vs session 3) without pairwise registration. Keeping track of which session each component was active in enables efficient and stable comparisons.

Expression Data

Expression Detail
Antibody Labeling
Phenotype Data

Phenotype Detail
Acknowledgments
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