FIGURE

Fig. 3

ID
ZDB-FIG-190606-22
Publication
Giovannucci et al., 2019 - CaImAn an open source tool for scalable calcium imaging data analysis
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Fig. 3

(a) Top: Individual manual annotations on the dataset K53 (only part of the FOV is shown) for labelers L1 (left), L2 (middle), L3(right). Contour plots are plotted against the max-correlation image of the dataset. Bottom: Disagreements between L1 and L2 (left), and consensus labels (right). In this example, consensus considerably reduced the number of initially selected neurons. (b) Matches (top) and mismatches (bottom) between each individual labeler and consensus annotation. Red contours on the mismatches panels denote false negative contours, that is components in the consensus not selected by the corresponding labeler, whereas yellow contours indicate false positive contours. Performance of each labeler is given in terms of precision/recall and F1 score and indicates an unexpected level of variability between individual labelers.

 

Expression Data

Expression Detail
Antibody Labeling
Phenotype Data

Phenotype Detail
Acknowledgments
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