Genomic Feature

sud131

ID
ZDB-ALT-250123-17
Name
sud131
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Akinori Kawamura Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 3
Variants
Variant Type
Small Deletion
Variant Location
Chr 3: 23723178 - 23723182 (GRCz11) (1) Details
Nucleotide change
CGAAC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AAACAATCGCACTCTTTTATGAACTATTATTATACCATAATTAGCGCATGTACTAGCTGCCATGGTGTGCGTAAAAAAGGGGGCACATGTAATGTTTGCAAAATCATTAGTCGTTCGTAACCAGACATGCTGTTTCTCGTAGTATACATGCTGATCATGTATTTTTTTTAGAATTTCTTATGGAACGTGTAACATTAAATCAGCACACATTGTCCCGATCCCAAATGTTATCCTAAATAGACAATGACCTTTTTTGTTTACCATTTTGCATAATCTAATCTTTTAACAGTCGCGTATTTACTTGCAAATACATGCAGATCGTTTTCTTAATGTTCTTAAAAATATATAATACTTTATTATTGTAGCGTGTGCATCTAATTTGAATTTAAGAATATCTAGCTTCTTCAATGTGTGGGGCTGTGTGTGTGTGGGTATATGTGTGTGTCTGTTTGTGTTATACGTTCTGTAACGTGTCGCTTTTTCTATCCCAACAGTGAGCC
CGAAC/- TATTCAGGGGGTGAACCAAAGCGCTCGCGCACAGCGTACACGAGGCAGCAAGTCCTGGAATTGGAGAAAGAGTTCCATTACAACCGCTATCTGACCCGCAGAAGAAGGGTGGAAATCGCCCATACACTATGCCTATCTGAACGACAAATTAAGATTTGGTTTCAGAACCGGCGCATGAAGTGGAAGAAGGACCATAAGCTTCCGAACACCAAAATACGCAGTAACTCTGCAAGCACTAATTCAAGCGGCTGCCCGACATTGTGCAGCAATCAGAGCCGAGCAAGCGGACCTCCGCCAAGTCTATAGCCCTCCACTGATGACCAAGCACGTACAATTATAAAAGAAACATTTTCTGGAGTGTAGAACGTGGATTTTACCCGCGTTGTGTCTCCCTACTCTCCCCTGCACATTAGAAACAGGGATAAAGTACGAGCAAGATGTGTGGGAAAGGGCAAAGTAATGTTCATCTCTTTTAAACACTAAAATGGGTGAAGGCTTGA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
hoxb4asud131/sud131HomozygousUnknownFig. 4 with image from Maeno et al., 2024
hoxb4asud131/sud131; hoxb5asud125/sud125ComplexFig. 4 with image from Maeno et al., 2024
1 - 2 of 2
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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