Genomic Feature
hza109
- ID
- ZDB-ALT-230808-8
- Name
- hza109
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Ze-Xia Gao Lab
- Current Source
- China Zebrafish Resource Center (CZRC) ( order this )
- Other Pages
-
Notes
| Comment | Citation |
|---|---|
| 20bp deletion between 164bp to 184bp of the wild-type runx2a coding sequence, ... | Zebrafish Nomenclature Committee |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 17: 5430086 - 5430105 (GRCz11) (1) Details
- Nucleotide change
- TGACGGGACGGTGGTGACGG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 20 bp deleted in Exon 3 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TTTTGCTCAATAAAAGCCATCCAGCTGTAGTTTACAGCTATATTTGGACACTATGAAAAACACACTGTTCCTTCATGTTGTCTTAACTCAAATGGATTAAGTTAAGTTCATTGTTTTTACAAATTTAATTGCATTTAACACAATTAAGTTTTCCCAAAAATACACAAGAATTGTGTTGATTCAACTCATTTTAAATGAGTCTAAAGTAGTTTGAACAAGCAGCAAAAGTCATTGTTTTGAGTGTAAATGCTATTTGCAACGTCATTTTTAACAGTGTGAATGTTTGCTGATCATTTTCAGGAATATTTTGCTTAATTAAAGCCATTAAGCTGTTGTTTAGAGCTATATTTGTTGGTACTGCTCTGTTCGCACAGTTGTAATACTATATATTATAGTGTATAATGAGTCTGGCAGGCCTGTTTTCATCAGTATGTGTATGTAAACAGGCTGACCTGAGCGCATGTCTGTCCTGTTCAGGTTGTGGCTCTGGGAGATGTTCC
TGACGGGACGGTGGTGACGG/- TAATGGCTGGAAATGACGAAAACTATTCGGCTGAGCTGAGAAACGCCTCCGCTGTCATGAAGAATCAGGTGGCGCGTTTCAACGACCTGAGATTTGTTGGCAGAAGTGGAAGAGGTTGGTGCTTTAATTGTATTTATTCTTCACTGGCCGCTTGGTTTGCTTTGGCTGAATCATAAAAAGGGTATAAAAAAAATCACGTAAGACGTTTGGTTTACAATGAATGACACGCTGGAAATAAAACGGCAGCACAATCCAGATGTAAGTTTCACCCAGATGAAATGCTCTGCTTATTGATTCAAAGTGCATAGATGGCTTCTGTGTGACCTTCTAAAGAATATATGTAAAATGTATGTGTATATATATATATATGTATATAAATAGTTGAAGTCAAAATGATTATCCCTCCAGTGATTTTTTTTTCAAATATTTCCCAAATGATGTTTAACAGAGCTAGGAAATTTTCGCAGTATTTCCTATAATATTTTTTCTTCTGGAGAAAG - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None