Genomic Feature

ihb666a

ID
ZDB-ALT-230418-1
Name
ihb666a
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yonghua Sun Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Browsers
Variants
Variant Type
Small Deletion
Variant Location
Chr 6: 34682074 - 34682126 (GRCz12tu) (1) Details
Nucleotide Change
TGATTACTTACATGACAGGAACAATGATTAAAACTGGGAGATGATAATGGTGT/-
Variant Notes
53bp is deleted from the regulatory domain of foxd3 gene, located in 70kb  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
53 bp deleted in Exon 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TGGAGAACCATAAGAGGGGCTGCTCATAGGCATAACAAGAGCAGAGGTGATGCCTCCAGAGGTGAGAACTGCCCTGAAGTTCTTGGGGCATCCTCACCTTGTTAGCCTGATGAGACCTGCAAAAGGCGGTTGTTGCTCCAGTTTGAAGCTGATTAAGAATGCTGGTGAAAATCACAGCTCCATGCGGAGAGAACATCTCTGAGGAACAGGCGGGGGCAGATGGGAGGTGGTCACAGGAAATCACAGTAGCCCTGACACTGTTTGTGGTGCTGGAGTGTTAGTTCTCACCCATCATTGCCTTTGGTGCCACGGCCCACACTGGGGGAAGTTGTTTTAGCACATTCATAAAAAGCACCATTTAGCATTGTCACAACAACATTTAAAGCAGTGCTACTGAATAGTCATGCACGCACTACAAAGGCAGATGAGGGCCTTTGCACAAGTGTATGTATTACTCTCGGGTAACTGTGAATGATCTCTCCGGGTACAAGTTATGGTGT
TGATTACTTACATGACAGGAACAATGATTAAAACTGGGAGATGATAATGGTGT/- GGCATTCATGCATTGACAACTTTGACTCTAGGTTCCTTTCCGAAGGTTGATGTATGGCATCATTAGGATAACCTCAGGCCTTTAAAGACACTAATCTTCTTCATCTTGTCCTTCACACTTTCTTGTTTTGACATTtagaaatatgtgtgtgtgcacagtacCTGTGGTGTGTCTATTGGCAATAAAGGTGCTCATAGCAGCATAGTGTTTTAGGTGTTTATCTGcatattacacatttttaaaaagcccCATAAAAACAGGATAAatgtatagtaaaaaaaaagatagatggataaaaCTTCACTGTGGCGCTTGCTTGTATAAAACTTGCTGTTATGATGGTAGGATGTTACAGAGACCCGGAAGGGAAGTTATGGTGGGGGAAAAAATGGGTGGTAGAAAAAATCTTTCCCTTagaaagatgttttgcgttattttgcaaagatgttttgcattcctTCCCAAAACTGttgttccacaaacacttcctgttcacttca
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations