Genomic Feature
pc43
Notes
Comment | Citation |
---|---|
homozygotes did not survive past 6 dpf | Berger et al., 2022 |
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 9: 32307729 (GRCz11) (1) Details
- Nucleotide change
- C/T
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- C>T in Exon 2 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
ACAAGAGGGGCCTGATATTAGAGGTTTTATGATCTAGTTATTTGGCGAACAGCAGTCAGCTAGCAGCCGTCTACAAATACCCGGATGAACATTGCTGAATATGTATTTACATTAAATTATTATGTTTAAAACACAACAAAGTTCATTGACAGTGTCCTGCAGCATTAAGTAGGTACTCCTAGGTAACCCCCTAGGTACTTTTTCTCAATTATTTGTCAAGAAATTGTCATTACGTTTGGGACGATTTACTATAGTTTTACTGTGCATTAAAACTATGATTGCAACATAAGGAATGTGTTAATGTAATCTAACTGCGGGCAAAATTTAAGTCAAGTGAAGGATATTTTGATCATGTATGTATTGTTGACATCAGTTTTTTTAGAATTATTCTAGTGTTGATTTTACTGACTTGTTTACAATCTTGTTTTTGGGTGTTGTAGGACTTCTATAACTGGTCTGATGAGTCTTTTGAAGAAATGGACAGCACCTTGGCTGTGCAA
C/T AAGTGAGAGCTTTTACTTCTTTGAAGGTTTTGAGAAGGGTTTAATCACTTTCAATGACCCTGATATTCTTTGTACTGATGACAAAGTCTTAACTCTGATGCTTAGATAGTTTGCTTAACTGAAAGCGACATTCAGCTAGCTTGTTTTCCTTTACATGGTTGTTTACACTGTTTTGTTTGAATAAATCATCATGGATTTTGACTATATCTCTTTGCTGATTAAAAGTATTTTGTCTTTTTGTTGTTTTAATACTAATACATTAAAATAATCAATTAGGATAAACAGGATTTTTAGAAAGCTTTTGAGCTTTAAACCTTTCATGATAGTGTGTTATTATTATTGAGAATATAATAATCAAGAAACTAGGTGGCATGAAATTAGTTGTGTTCAAGAGTTGACATTCTTTTGTGTCTATTTAATAGAAAAAAAATATTTTTTGAAGTTTATCATGAAGTCATTTTAATTATGAGACAATTTAAAAGTTTTTTTTGTTCTATGCA - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
mob4pc43/pc43 | Homozygous | ♀+/- ♂+/- | 2 figures ![]() | ||
mob4pc43/pc43 (TU) | Homozygous | ♀+/- ♂+/- | 4 figures ![]() | Fig. 2 ![]() | |
mob4pc43/pc43; pc21Tg; pc22Tg | Complex | Fig. 3 ![]() | Fig. 3 ![]() | ||
mob4pc43/pc43; pc22Tg; pc47Tg | Complex | Fig. 3 ![]() | |||
mob4pc43/pc43; pc46Tg | Complex | Fig. 3 ![]() | |||
mob4pc43/pc43; rw021Tg | Complex | Fig. 6 ![]() | Fig. 6 ![]() | ||
mob4pc43/+; mob4pc44/+ (TU) | Complex | Fig. 2 ![]() | |||
cct3sa1761/sa1761; mob4pc43/pc43 | Complex | Fig. 5 ![]() | |||
cct3sa1761/sa1761; mob4pc43/pc43 (TU) | Complex | ||||
mob4pc43/pc43; strn3pc45/pc45 (TU) | Complex | Fig. 7 ![]() |
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Supplemental Information
- Genotyping protocol
- None