Genomic Feature

nch1

ID
ZDB-ALT-230106-5
Name
nch1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Genevieve Kendall Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 8
Variants
Variant Type
Delins
Variant Location
Chr 8: 46641580 - 46641592 (GRCz11) (1) Details
Nucleotide change
CAATTAAAGAGCC/GTTTGAATG
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
9 bp inserted / 13 bp deleted in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ATGTATTAATTTTCATAGCGTATAAGAGTTTATAAAGTTTGTAAAAGATAGCAGGACCAATATTATTTTTGAGCTCCTTTTTGAGAATAAAAACAGACAAGAGAGCAACCTGAAGCTGATTGGATGTCCAGCAGAAAGTATGGATGCTCTTTTTTGAGCACCAATAATGTGAGCAGTGCATTGACATGCTAATGGAGCTTTCCTTAAAAAGGAAAGAACTAGGGTGAATTCCTTCACTCAACTCAAGGAAGTCTGATAGTCCTTATTCATCTGGATTTTTTAAACACACTGAGCATTTAAGGACAATGGCTGCAGCATCCAACAGTGCGGCGACGGCAAAACCCCAAAACGTTAAAAAGGTGATTAGGTGATTTATTTGTTTGCTTGTTTTCAGCATGTGCTTATTGTGTTTGAAATTAATAGAAAATTATTTTATCTTCCAGGTTTCAAAACCACTGATGGAGAAAAAAAGAAGGGCGCGTATAAATAAATGTTTGAAT
CAATTAAAGAGCC/GTTTGAATG TTCTGGAAAGCGCCTGTTCTAACAATGTAAGAAATGTTTATGGATTTTATAAAGTGATATTGATATAAAAATACAAAAATTCTAACACCACATCTCTATCTCAAAATCTAACTTGTGTGTTTTTATACCTATTCAGATCCGCAAGCGAAAACTGGAAAAGGCTGACATTCTGGAGCTCACTGTGAAACATCTGAGGCATCTGCAAAATACGAAAAGAGGTTTGTGATTATTTTAGATTTTATTTATATTAATAATCAATGTGTTTAATTAGGTTAATTTAATGAAATACTGGATTAATGATTAGAAATGTAAACAATAACTAGGCCTAAATATGAACTAAAGATCGATTTCTCTAAATGCAGGACTGTCCAAAGCTTGTGACTCTGCTGAATATCACGCTGGTTACAGAAGTTGTCTCAACACTGTAAGTCATTATCTACGAGCGTCGGACACAGACAGAGATTCCCGCTCCATCATGCTGACAAATCTTACGAGCGGTC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
her3nch1/nch1 (WIK)Homozygous♀+/- ♂+/-3 figures with image from Kent et al., 20232 figures with image from Kent et al., 2023
her3nch1/+ (AB)HeterozygousUnknown
her3nch1/+; her3nch2/+ (WIK)Complex
1 - 3 of 3
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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