Genomic Feature

mnu301

ID
ZDB-ALT-220824-1
Name
mnu301
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Kaslin Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 22
Variants
Variant Type
Delins
Variant Location
Chr 22: 11528010 - 11528397 (GRCz11) (1) Details
Nucleotide change
CAGCGAGGGCGGATATAGCGGCTCAGTACACAACAGTCAGCCGGCTGGATCAAGGTTAATATGTTTTACATCATTTCAGGTAATATATGGATTTTCACTTGTATAAATTTTAAAACTATCCCATTGTTTGATTTTCAAAGGGATTGGTCTGGTTCTTGAAGAATTGCGGAAAGCCGGATTTGAAAATGACACTCTGGTGATCTACAGTTCAGATAACGGAATTCCGTTCCCCAACGGACGCACTAACCTGTATGGCTCAGGTGTGAAGGAGCCCATGTTGCTCTCATCACCTGAACACCAGCAGCGCTGGGGGAAACTCAGCCAGGCCTACGTCAGTCTACTGGGTAAGACACAAACTACAGCACCATTATTTTGATCTCAAGGAGAA/GAATAGCGGATATAGCGGCTCAGTACGTCAG
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
31 bp inserted / 388 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AGTCTTAGACATGAGAAACAACATTGGCTTTAATGCATTGTTAGATTCTCATTTTTCTCGAAACACTAGTTTTGATCAGGACTGAGGTCGATTAACAGATTTATAAAAACTATTTTGAAAAAAATATTTATCGGATGCATTATTAAAGCAGTTTAATTCAGTGGATGTCTTTATCCCGAACATAACAATAGGCTAGTAAATTTGAACAGTGCACAAGGGTTCATTTACTTTAAAATACATTCTAACATGCTCTGGAATTGGACCTTCTTCTGAATATATCTTATACCTGAAATCACATATTTAAACTAATATTAATATCATAAATGTTAAGAAGCTGACGTTTTTGAAATTAACAAGTAAATACATTTGTTTGGATTTAGTCTTCATTTCCCTCTGGAAAATGACTATATTAAAATCTTCTAGATAGATGTCTAGTTTTTCCTACCCATCAGTCTGTTTAATGTCAAACAAGGTTCCGTATTTTATTCCGGACACTCCTG
CAGCGAGGGCGGATATAGCGGCTCAGTACACAACAGTCAGCCGGCTGGATCAAGGTTAATATGTTTTACATCATTTCAGGTAATATATGGATTTTCACTTGTATAAATTTTAAAACTATCCCATTGTTTGATTTTCAAAGGGATTGGTCTGGTTCTTGAAGAATTGCGGAAAGCCGGATTTGAAAATGACACTCTGGTGATCTACAGTTCAGATAACGGAATTCCGTTCCCCAACGGACGCACTAACCTGTATGGCTCAGGTGTGAAGGAGCCCATGTTGCTCTCATCACCTGAACACCAGCAGCGCTGGGGGAAACTCAGCCAGGCCTACGTCAGTCTACTGGGTAAGACACAAACTACAGCACCATTATTTTGATCTCAAGGAGAA/GAATAGCGGATATAGCGGCTCAGTACGTCAG TTCAAATGAAATGTAGCTGTTCATTTACTCACCCTTGGACCATTTAAGATTGTAAGTGACATTTTATTCTGTCATGCATTACAGAAGATCTGCATGGTCATGAGCTGTGTTGTAATCACTTTTAACCACTAGGTGGCGCCCAATTCTAATTTAACAATACACCTTCATGCACTTGTTCCTGTTTTTGAGGCCTGATGATGAAAACACTCTTTACTGAATGCCAGTTTTGTGCCATAATAGAAATACTGAACTTTTTTTGTACTAACGGACAGTTATTTGGATAACAACAAATCTCACTAGTGAGCATTTACTGTTCATGTAGTGTAGAGCAGGACGAAGCTTTTTTTTGTCTTTTTACTGAATTACAATTTAGACATTTCTGTGTAAAATAATTGTGCAATGATGGAAAATTTTTGCACACGATTCTGTTTAAATTCTATTTATTTACAGATAACCATCAGTCAGTGTAACAATATCATCTGTTTCTACAACTCATATGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
sgshmnu301/mnu301 (TU)Homozygous♀-/- ♂-/-5 figures with image from Douek et al., 2021Figure 1 with image from Douek et al., 2021
sgshmnu301/+ (TU)Heterozygous♀+/- ♂+/-Figure 1 with image from Douek et al., 2021
sgshmnu301/mnu301; mq8Tg (TU)ComplexFigure 3 with image from Douek et al., 2021Figure 3 with image from Douek et al., 2021
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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