Genomic Feature
szy5
- ID
- ZDB-ALT-220120-11
- Name
- szy5
- Synonyms
-
- smu10 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Yiyue ZHANG Lab
- Current Source
- China Zebrafish Resource Center (CZRC) ( order this )
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 2: 10772111 - 10772133 (GRCz11) (1) Details
- Nucleotide change
- TCTTCTCAACAGTCCCCGCTGAG/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- None
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
GCGCCGTGCGGTTCCTCGACTTCAAATAGCTTTTGCTTTATTTGGGAGGTTTTGATTGCTAAAGGCCGCACGATAGAGATTTGACAGACCTGCTGTTCTGAGTTCAGTGAACATCAGGTGCACTTTTTCACACCAGCGCTCTTGGGACTGAATCCATATTTTTGTGCCATTTTCAGGCTAGATTGGAGAGCTGTGAGTGATTGGTGACCCTGAAGCTGATAACGGAGCGTAAACATGCCGAGGTCATTTTTGGTGAAGAGCAAACGGGCGCACAGTTATCATCAGCCCCGTTACCTGGATGACAACTGCATCTCAATCGAGAAACTTCTCACTTGCCAAGGTACGACGTTTATATCAACGTTAAAATTTATATTTCTATTTATTATCGCATTGTTAATTTTCAATTGGGTTTAGAAAGTCAAACCGGACAGGCTCCTGAAAGCCCGCTGGATGTGGGCAATCAGTCCCCTAAAGCCAGCATGGTGTGCACGGCAGATCAG
TCTTCTCAACAGTCCCCGCTGAG/- CTGCGAGGGCAGTGTGTGTGACCGCTCATCCGACTATGAGGACTTCTGGAGACCCCTGTCATCAGGAACCTCGCCGGGTCTGTTCTAGCTTAAACTGTAAAATTAAACTGTATTTGTATTTTCACAATAATTATTTCAGAGAATCTTTACAAAAATGTGAACGTATTAGGCTATACATTAGAAAAGAGTGAGGATGGTTGCAACATGATGCAGTTGCAACAAGACATCTTATTCCTCCATTCAGGAATGAGAGTGATAATATTCACACTACATAGTCTCAGTTAGATGCCTCTTTAATCTGAGAGAAATTACCCATATGTGACCATTCCTTCAGTATAAAACCCATTTTGAGGTAAAAGAGTAATTTTTTATGTTAAGAAAATTTCTCATACTGTCTAATTAGTTTTGTGTGTGTGTGAAACATTGTTCATTTGTATAATTTAAATCACTGTTTTCTTGGTTTTAAAGGTATAGCTATCAAGCGTTAAATCTATTATGTT - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
gfi1aaszy5/szy5 | Homozygous | Unknown | 4 figures ![]() | 7 figures ![]() | |
gfi1aaszy5/+ | Heterozygous | Unknown | FIGURE 1 ![]() | ||
gfi1aaszy5/szy5; i114Tg/i114Tg | Complex | 2 figures ![]() | 2 figures ![]() | ||
gfi1aaszy5/szy5; cebpahkz7/hkz7 | Complex | Fig. 4 ![]() | |||
gfi1aaszy5/szy5; cebpahkz7/+ | Complex | Fig. 4 ![]() | |||
gfi1aaszy5/szy5 + MO2-etsrp | Complex | FIGURE 4 ![]() | |||
gfi1aaszy5/szy5; gfi1abszy10/szy10 | Complex | 2 figures ![]() | |||
gfi1aaszy5/szy5; gfi1bszy9/szy9 | Complex | 2 figures ![]() | |||
gfi1aaszy5/szy5 + MO1-irf2bp2a | Complex | Fig 4 ![]() | Fig 4 ![]() | ||
gfi1aaszy5/szy5 + MO5-sox7 | Complex | FIGURE 4 ![]() |
1 - 10 of 12
Show
Supplemental Information
- Genotyping protocol
- None
- Wu, M., Chen, Q., Li, J., Xu, Y., Lian, J., Liu, Y., Meng, P., Zhang, Y. (2022) Gfi1aa/Lsd1 Facilitates Hemangioblast Differentiation Into Primitive Erythrocytes by Targeting etv2 and sox7 in Zebrafish. Frontiers in cell and developmental biology. 9:786426
- Gao, S., Wang, Z., Wang, L., Wang, H., Yuan, H., Liu, X., Chen, S., Chen, Z., de Thé, H., Zhang, W., Zhang, Y., Zhu, J., Zhou, J. (2021) Irf2bp2a regulates terminal granulopoiesis through proteasomal degradation of Gfi1aa in zebrafish. PLoS Genetics. 17:e1009693
- Wu, M., Xu, Y., Li, J., Lian, J., Chen, Q., Meng, P., Lu, T., Xie, H., Zhang, W., Xu, J., Zhang, Y. (2021) Genetic and epigenetic orchestration of Gfi1aa-Lsd1-cebpα in zebrafish neutrophil development. Development (Cambridge, England). 148(17)
1 - 3 of 3
Show