Genomic Feature

stl582

ID
ZDB-ALT-210903-2
Name
stl582
Synonyms
  • 7 bp del (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Gurnett Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 24
Variants
Variant Type
Small Deletion
Variant Location
Chr 24: 40662229 - 40662235 (GRCz11) (1) Details
Nucleotide change
ACGCACA/-
Variant Notes
Located in exon 16 or 17.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GTTCAACAATTTTCTGGAACTCAAGTCTTGAGAGAATACCACGAGCTCTTGCTTGAATACCAGTAATGATAAGAGCAAGACGGTCATCTCGCATCTCCTCAAGAGTACCCAGAAGACCAGCCTTGAAGAACACCTTAGTATGTCCTAACTTGTACTGGTTGTGATCAATGTCCAGTGACCCCAGGAGTTTCTCAGCAGCTTTCTTATTGTCTATAAATTGTCCCTCAGGGTTAGCAGATGGGTTCAGAATACGGTATCTGACAAGAGGTAAAAAAGTAACAAGGTTTTGTGATTTGTGCATTAAAGGTATATTTGTTTATTTGATTTTAGCTGTCCTGTTTAGGTTCTTACCTCTGTTTGAAATCTCCATACAGGATCCTGTTGGGGAAGCCCTTTCTGCAGATTCTGATGCCCTCCAGCACACCGTTACAGCGCAGCTGGTGCATGACCAGAGGATTCTCCATCGCCCCAGGAGTCTTAGTCTCATTGGGGATCAGGCA
ACGCACA/- AAGTGAGGGTGGGTTGACCTCAAGTTGGTCATCAGCTTATTCAAGTTCTCCTATAAGGTTACAGAAATCACAACGTCATAATATTTTTGAAGTACACACTTTGGTTTCATTTGTTTTTTGTTTTTTTTTAAATTGCTTTATAACTCTTACCCTATGAAGGGCTGACACAGTCTGGAAAGAAGAACCCTTCTTTTTTCCACCTCCTTTACCTCCCTTGGAATCTTGGGCTGAATCATGTAAAATCATGTTATTCTGACTAGTCATAGTTCAACCCCCGAAAAATGTATTCTGAAAACATCTATACTGAGCATCAGAAGAACTCACCAGAGTCAGCACCAGAATATCCAGCAAACAAGAATGACAACAGCTTCACTGTAGACTTTTGGAAGAGTCCGACAACAGTCTCATTCAGAGGATCCTTGTTCTTCACCAGCCAGTTTGAAATGTTGTAGTCAACAGTGCCAGCGTAGTGAACCAAAGCGAAATGGGCCTCTGGTCTA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
smyhc1stl582/stl582Homozygous♀+/- ♂+/-5 figures with image from Whittle et al., 2020
smyhc1stl582/+Heterozygous♀+/- ♂+/-Figure 2 with image from Whittle et al., 2020
smyhc1stl584/+; smyhc1stl582/+ComplexFigure 2 with image from Whittle et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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