Genomic Feature
rj33
- ID
- ZDB-ALT-210607-5
- Name
- rj33
- Synonyms
-
- E3fs1 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Xiao-Jian Sun Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 16: 16266715 - 16266717 (GRCz11) (1) Details
- Nucleotide change
- GTC/A
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 1 bp inserted / 3 bp deleted in Exon 3 (1)
- Transcript Consequence
- Frameshift (1)
- Protein Consequence
- None
- Flanking Sequence
-
GTTGTTGAAAGTGTGCCAGTTGTGTATGATTTGAATGCATGTAAAAGAAGAAAAGTAATTTGAACTAGGGCTATATTATATTTCATAGACTTTTAGTATTAGATCTTGTTTTTTTATAAAAAGAGGTTGCTTTAATTTTTTGTAGTCATATTTTACGTACACTGCAATAATTTTCTGCTTCCTTCTTTTCATGCTGTTCTTTTGTGACAACAGAGAAGATGTAAAAGATTGTTCGGTAGGTCTTTCAATTCAGATATCTCAAAGTTTTACATACAAAATGTTGATTACACATTTTTGCTCAAAAAACATTTTTTTTGTACTATTTTTGTATTCCTAGATCAAGGTTGAAAACTTCCCTAAGCAAGTCATATTCAAAGGCCTTGCACCTAGGGTCGTATTGACAAACCATCTTCTGATGAAAGGAAACAAGACTAAAGTAAACCTTGAGGAACAGGGTCGACAGAAGGTCTCCTTCAGCTTAACGCAGACAAAGAAACCAC
GTC/A AAAATGTGTTTCTACCACCACCAAGCCCTGAGAAATCTGCAAGTGAACATTCTTCTACATCACAAGCTGGACCTGTACCTGTTTCCGTTCAAGCAGGACAAACCTATGAAACTAAGAATGTTGACACAAATACTCCAGCAGTTGGGGAGACCCAAACAGCCCCCACAGTATCCTTTTCTCTCAGATCAAGGCATGTTCTTGGAAAGATGCATTTTAAGAAACAGATTCTCAGCAGTACAGTTGTTGGGGATAAATCCACGGTCAGCACTGCCTCAGCAGAGATATCAGAGCCAGTTGTCCCATCTGATAAAATTACATCTTCCGCAAAGGTTGAAACTGAAAACTCCTTGCAGCAATCTCACAAGAACTCTGTTGTTGATGGTTCTTCTGAAAAGGTTAGCAAAGAGGAAAATCCTCAGGAGAAAATAGCCTCATGCCTTAAAGGTCCTGATTCTTCCCATATTGGGAAGGAAGATACAGATTCTTCCATTATTTCTGAG - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
setd2rj33/rj33 | Homozygous | ♀+/- ♂+/- | 3 figures from Liu et al., 2020 | 3 figures from Liu et al., 2020 | |
setd2rj33/rj33 | Homozygous | ♀-/- ♂+/- | 2 figures from Liu et al., 2020 | ||
setd2rj33/rj33 | Homozygous | ♀+/- ♂-/- | 2 figures from Liu et al., 2020 | ||
setd2rj33/rj33 | Homozygous | ♀-/- ♂-/- | Fig. 5 from Liu et al., 2020 | ||
setd2rj33/+ | Heterozygous | ♀+/+ ♂-/- | |||
setd2rj33/+ | Heterozygous | ♀+/- ♂+/- | Fig. 3 from Liu et al., 2020 | Fig. 4 from Liu et al., 2020 | |
setd2rj33/+ | Heterozygous | ♀-/- ♂+/+ | |||
setd2rj33/rj33; s843Tg | Complex | Fig. 2 from Liu et al., 2020 |
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Supplemental Information
- Genotyping protocol
- None