ZFIN ID: ZDB-LAB-180319-1
Xiao-Jian Sun Lab
PI/Director: Sun, Xiao-Jian
Contact Person: Jin, Yi
Email: jy88235@126.com
URL: http://daoshi.shsmu.edu.cn/Pages/TeacherInformationView.aspx?uid=07e08276-dbd6-4df5-8c65-9d3ae53fb1cb&from=s&pId=071000&tId=
Address: Zebrafish Core Facility at RuiJin Hospital 197 Ruijin Road II, Building 11 Room 806, Shanghai, 200025
Country: China
Phone: +86-21-64370045-610806
Fax: +86-21-64743206
Line Designation: rj


GENOMIC FEATURES ORIGINATING FROM THIS LAB
Show all 5 genomic features


STATEMENT OF RESEARCH INTERESTS


LAB MEMBERS
Liu, Dian-Jia Graduate Student Zhang, Fan Graduate Student Chen, Yi Research Staff
Jin, Yi Research Staff


ZEBRAFISH PUBLICATIONS OF LAB MEMBERS
Zeng, Q.Y., Zhang, F., Zhang, J.H., Hei, Z., Li, Z.H., Huang, M.H., Fang, P., Wang, E.D., Sun, X.J., Zhou, X.L. (2023) Loss of threonyl-tRNA synthetase-like protein Tarsl2 has little impact on protein synthesis but affects mouse development. The Journal of biological chemistry. 299(5):104704
Tang, R., Chen, Y., Yan, F., Chen, K.M. (2023) Phase Retrieval-Based Phase-Contrast Imaging and CT of Living Zebrafish. Zebrafish. 20(3):103-112
Deng, Y., Han, X., Chen, H., Zhao, C., Chen, Y., Zhou, J., de The, H., Zhu, J., Yuan, H. (2023) Ypel5 regulates liver development and function in zebrafish. Journal of molecular cell biology. 15(3):
Tang, R., Chen, Y., He, N., Li, Y., Jin, Z., Chen, K.M., Yan, F. (2022) Effect of gadopentetate dimeglumine on bone growth in zebrafish caudal fins. Toxicology letters. 374:11-18
Pan, X., Hou, X., Zhang, F., Tang, P., Wan, W., Su, Z., Yang, Y., Wei, W., Du, Z., Deng, J., Hao, E. (2022) Gnetum montanum extract induces apoptosis by inhibiting the activation of AKT in SW480 human colon cancer cells. Pharmaceutical biology. 60:915-930
Hu, R., Xu, Y., Han, B., Chen, Y., Li, W., Guan, G., Hu, P., Zhou, Y., Xu, Q., Chen, L. (2022) MiR-202-3p determines embryo viability during mid-blastula transition. Frontiers in cell and developmental biology. 10:897826
Zhen, L., Lan, J., Zhang, S., Liu, L., Zeng, R., Chen, Y., Ding, Y. (2022) A NIR fluorescent probe for the specific detection of hypochlorite and its application in vitro and in vivo. Analytical methods : advancing methods and applications. 14(22):2147-2152
Dai, Y.T., Zhang, F., Fang, H., Li, J.F., Lu, G., Jiang, L., Chen, B., Mao, D.D., Liu, Y.F., Wang, J., Peng, L.J., Feng, C., Chen, H.F., Mu, J.X., Zhang, Q.L., Wang, H., Ariffin, H., Moy, T.A., Wang, J.H., Lou, Y.J., Chen, S.N., Wang, Q., Liu, H., Shan, Z., Matsumura, I., Miyazaki, Y., Yasuda, T., Dou, L.P., Yan, X.J., Yan, J.S., Yeoh, A.E., Wu, D.P., Kiyoi, H., Hayakawa, F., Jin, J., Wang, S.Y., Sun, X.J., Mi, J.Q., Chen, Z., Huang, J.Y., Chen, S.J. (2022) Transcriptome-wide subtyping of pediatric and adult T cell acute lymphoblastic leukemia in an international study of 707 cases. Proceedings of the National Academy of Sciences of the United States of America. 119:e2120787119
Chen, K., Wang, P., Chen, J., Ying, Y., Chen, Y., Gilson, E., Lu, Y., Ye, J. (2022) Loss of atm in Zebrafish as a Model of Ataxia-Telangiectasia Syndrome. Biomedicines. 10(2):
Zhang, F., Zeng, Q.Y., Xu, H., Xu, A.N., Liu, D.J., Li, N.Z., Chen, Y., Jin, Y., Xu, C.H., Feng, C.Z., Zhang, Y.L., Liu, D., Liu, N., Xie, Y.Y., Yu, S.H., Yuan, H., Xue, K., Shi, J.Y., Liu, T.X., Xu, P.F., Zhao, W.L., Zhou, Y., Wang, L., Huang, Q.H., Chen, Z., Chen, S.J., Zhou, X.L., Sun, X.J. (2021) Selective and competitive functions of the AAR and UPR pathways in stress-induced angiogenesis. Cell discovery. 7:98
Wu, S., Chen, K., Xu, T., Ma, K., Gao, L., Fu, C., Zhang, W., Jing, C., Ren, C., Deng, M., Chen, Y., Zhou, Y., Pan, W., Jia, X. (2021) Tpr Deficiency Disrupts Erythroid Maturation With Impaired Chromatin Condensation in Zebrafish Embryogenesis. Frontiers in cell and developmental biology. 9:709923
Xiong, J., Wang, N., Zhong, H.J., Cui, B.W., Cheng, S., Sun, R., Chen, J.Y., Xu, P.P., Cai, G., Wang, L., Sun, X.J., Huang, J.Y., Zhao, W.L. (2021) SLC1A1 mediated glutamine addiction and contributed to natural killer T-cell lymphoma progression with immunotherapeutic potential. EBioMedicine. 72:103614
Huang, Y., Yu, S.H., Zhen, W.X., Cheng, T., Wang, D., Lin, J.B., Wu, Y.H., Wang, Y.F., Chen, Y., Shu, L.P., Wang, Y., Sun, X.J., Zhou, Y., Yang, F., Hsu, C.H., Xu, P.F. (2021) Tanshinone I, a new EZH2 inhibitor restricts normal and malignant hematopoiesis through upregulation of MMP9 and ABCG2. Theranostics. 11:6891-6904
Liu, D.J., Zhang, F., Chen, Y., Jin, Y., Zhang, Y.L., Chen, S.B., Xie, Y.Y., Huang, Q.H., Zhao, W.L., Wang, L., Xu, P.F., Chen, Z., Chen, S.J., Li, B., Zhang, A., Sun, X.J. (2020) setd2 knockout zebrafish is viable and fertile: differential and developmental stress-related requirements for Setd2 and histone H3K36 trimethylation in different vertebrate animals. Cell discovery. 6:72
Chu, L., Yin, H., Gao, L., Gao, L., Xia, Y., Zhang, C., Chen, Y., Liu, T., Huang, J., Boheler, K.R., Zhou, Y., Yang, H.T. (2020) Cardiac Na+-Ca2+ exchanger 1 (ncx1h) is critical for the ventricular cardiomyocyte formation via regulating the expression levels of gata4 and hand2 in zebrafish. Science China. Life sciences. 64(2):255-268
Xie, Y., Gao, L., Xu, C., Chu, L., Gao, L., Wu, R., Liu, Y., Liu, T., Sun, X.J., Ren, R., Tang, J., Zheng, Y., Zhou, Y., Shen, S. (2019) ARHGEF12 regulates erythropoiesis and is involved in erythroid regeneration after chemotherapy in acute lymphoblastic leukemia patients. Haematologica. 105(4):925-936
Wang, P., Lux, L., Jin, M., Wan, Y., Wang, W., Hung, C.T., Albaqami, F.H., El-Toni, A.M., Alhoshan, M.S., Li, X., Zhang, F. (2019) Au/Ag Nanobox-Based Near-Infrared Surface-Enhanced Raman Scattering for Hydrogen Sulfide Sensing. ACS applied bio materials. 2:417-423
Yu, S.H., Zhu, K.Y., Zhang, F., Wang, J., Yuan, H., Chen, Y., Jin, Y., Dong, M., Wang, L., Jia, X.E., Gao, L., Dong, Z.W., Ren, C.G., Chen, L.T., Huang, Q.H., Deng, M., Zon, L.I., Zhou, Y., Zhu, J., Xu, P.F., Liu, T.X. (2018) The histone demethylase Jmjd3 regulates zebrafish myeloid development by promoting spi1 expression. Biochimica et biophysica acta. 1861(2):106-116
Xu, P.P., Sun, Y.F., Fang, Y., Song, Q., Yan, Z.X., Chen, Y., Jiang, X.F., Fei, X.C., Zhao, Y., Leboeuf, C., Li, B., Wang, C.F., Janin, A., Wang, L., Zhao, W.L. (2017) JAM-A overexpression is related to disease progression in diffuse large B-cell lymphoma and downregulated by lenalidomide. Scientific Reports. 7:7433
Wagner, K.D., Ying, Y., Leong, W., Jiang, J., Hu, X., Chen, Y., Michiels, J.F., Lu, Y., Gilson, E., Wagner, N., Ye, J. (2017) The differential spatiotemporal expression pattern of shelterin genes throughout lifespan. Aging. 9(4):1219-1232
Ma, A.C., Chen, Y., Blackburn, P.R., Ekker, S.C. (2016) TALEN-Mediated Mutagenesis and Genome Editing. Methods in molecular biology (Clifton, N.J.). 1451:17-30
Shu, L.P., Zhou, Z.W., Zhou, T., Deng, M., Dong, M., Chen, Y., Fu, Y.F., Jin, Y., Zhou, S.F., He, Z.X. (2015) Ectopic expression of Hoxb4a in hemangioblasts promotes hematopoietic development in early embryogenesis of zebrafish. Clinical and experimental pharmacology & physiology. 42:1275-86
Jia, X.E., Ma, K., Xu, T., Gao, L., Wu, S., Fu, C., Zhang, W., Wang, Z., Liu, K., Dong, M., Jing, C., Ren, C., Dong, Z., Chen, Y., Jin, Y., Huang, Q., Chang, X., Deng, M., Li, L., Luo, L., Zhu, J., Dang, Y., Chang, H.C., Zon, L.I., Zhou, Y., Chen, S., Pan, W. (2015) Mutation of kri1l causes definitive hematopoiesis failure via PERK-dependent excessive autophagy induction. Cell Research. 25(8):946-62
Gao, L., Li, D., Ma, K., Zhang, W., Xu, T., Fu, C., Jing, C., Jia, X., Wu, S., Sun, X., Dong, M., Deng, M., Chen, Y., Zhu, W., Peng, J., Wan, F., Zhou, Y., Zon, L.I., Pan, W. (2015) TopBP1 Governs Hematopoietic Stem/Progenitor Cells Survival in Zebrafish Definitive Hematopoiesis. PLoS Genetics. 11:e1005346
Ye, B.X., Deng, X., Shao, L.D., Lu, Y., Xiao, R., Liu, Y.J., Jin, Y., Xie, Y.Y., Zhao, Y., Luo, L.F., Ma, S., Gao, M., Zhang, L.R., He, J., Zhang, W.N., Chen, Y., Xia, C.F., Deng, M., Liu, T.X., Zhao, Q.S., Chen, S.J., Chen, Z. (2015) Vibsanin B Preferentially Targets HSP90β, Inhibits Interstitial Leukocyte Migration, and Ameliorates Experimental Autoimmune Encephalomyelitis. Journal of immunology (Baltimore, Md. : 1950). 194(9):4489-97
Liu, X., Jia, X., Yuan, H., Ma, K., Chen, Y., Jin, Y., Deng, M., Pan, W., Chen, S., Chen, Z., de The, H., Zon, L.I., Zhou, Y., Zhou, J., Zhu, J. (2015) DNA methyltransferase 1 functions through C/ebpa to maintain hematopoietic stem and progenitor cells in zebrafish. Journal of Hematology & Oncology. 8:15
Fan, H.B., Liu, Y.J., Wang, L., Du, T.T., Dong, M., Gao, L., Meng, Z.Z., Jin, Y., Chen, Y., Deng, M., Yang, H.T., Jing, Q., Gu, A.H., Liu, T.X., Zhou, Y. (2014) miR-142-3p acts as an essential modulator of neutrophil development in zebrafish. Blood. 124(8):1320-30
Du, T.T., Xu, P.F., Dong, Z.W., Fan, H.B., Jin, Y., Dong, M., Chen, Y., Pan, W.J., Ren, R.B., Liu, T.X., Deng, M., Huang, Q.H. (2014) Setdb2 controls convergence and extension movements during zebrafish gastrulation by transcriptional regulation of dvr1. Developmental Biology. 392(2):233-44
Dong, Z.W., Ren, C.G., Xia, Y., Su, D., Du, T.T., Fan, H.B., Yuan, H., Wang, L., Dong, M., Li, W.C., Jin, Y., Chen, Y., Deng, M., Liu, T.X., Gu, A.H., Zhou, Y. (2014) Pten regulates homeostasis and inflammation-induced migration of myelocytes in zebrafish. Journal of Hematology & Oncology. 7:17
Wang, L., Fu, C., Fan, H., Du, T., Dong, M., Chen, Y., Jin, Y., Zhou, Y., Deng, M., Gu, A., Jing, Q., Liu, T., and Zhou, Y. (2013) miR-34b regulates multiciliogenesis during organ formation in zebrafish. Development (Cambridge, England). 140(13):2755-2764
Ren, C.G., Wang, L., Jia, X.E., Liu, Y.J., Dong, Z.W., Jin, Y., Chen, Y., Deng, M., Zhou, Y., Zhou, Y., Ren, R.B., Pan, W.J., and Liu, T.X. (2013) Activated N-Ras signaling regulates arterial-venous specification in zebrafish. Journal of Hematology & Oncology. 6:34
Liu, Y.J., Fan, H.B., Jin, Y., Ren, C.G., Jia, X.E., Wang, L., Chen, Y., Dong, M., Zhu, K.Y., Dong, Z.W., Ye, B.X., Zhong, Z., Deng, M., Liu, T.X., and Ren, R. (2013) Cannabinoid receptor 2 suppresses leukocyte inflammatory migration by modulating the JNK/c-Jun/Alox5 pathway. The Journal of biological chemistry. 288(19):13551-62
Jing, C.B., Chen, Y., Dong, M., Peng, X.L., Jia, X.E., Gao, L., Ma, K., Deng, M., Liu, T.X., Zon, L.I., Zhu, J., Zhou, Y., and Zhou, Y. (2013) Phospholipase c gamma-1 is required for granulocyte maturation in zebrafish. Developmental Biology. 374(1):24-31
Yue, R., Li, H., Liu, H., Li, Y., Wei, B., Gao, G., Jin, Y., Liu, T., Wei, L., Du, J., and Pei, G. (2012) Thrombin Receptor Regulates Hematopoiesis and Endothelial-to-Hematopoietic Transition. Developmental Cell. 22(5):1092-1100
Langenbacher, A.D., Huang, J., Chen, Y., and Chen, J.N. (2012) Sodium pump activity in the yolk syncytial layer regulates zebrafish heart tube morphogenesis. Developmental Biology. 362(2):263-270
Zhou, T., Wang, L., Zhu, K.Y., Dong, M., Xu, P.F., Chen, Y., Chen, S.J., Chen, Z., Deng, M., and Liu, T.X. (2011) Dominant-negative C/ebpalpha and polycomb group protein Bmi1 extends short-lived hematopoietic stem/progenitor cells lifespan and induces lethal dyserythropoiesis. Blood. 118(14):3842-52
Yuan, H., Zhou, J., Deng, M., Zhang, Y., Chen, Y., Jin, Y., Zhu, J., Chen, S.J., The, H.D., Chen, Z., Liu, T.X., and Zhu, J. (2011) Sumoylation of CCAAT/enhancer-binding protein α promotes the biased primitive hematopoiesis of zebrafish. Blood. 117(26):7014-7020
Li, S., Yin, M., Liu, S., Chen, Y., Yin, Y., Liu, T., and Zhou, J. (2010) Expression of ventral diencephalon-enriched genes in zebrafish. Developmental Dynamics : an official publication of the American Association of Anatomists. 239(12):3368-3379
Fu, C.T., Zhu, K.Y., Mi, J.Q., Liu, Y.F., Murray, S.T., Fu, Y.F., Ren, C.G., Dong, Z.W., Liu, Y.J., Dong, M., Jin, Y., Chen, Y., Deng, M., Zhang, W., Chen, B., Breslin, P., Chen, S.J., Chen, Z., Becker, M.W., Zhu, J., Zhang, J.W., and Liu, T.X. (2010) An evolutionarily conserved PTEN-C/EBP{alpha}-CTNNA1 axis controls myeloid development and transformation. Blood. 115(23):4715-4724
Xu, P.F., Zhu, K.Y., Jin, Y., Chen, Y., Sun, X.J., Deng, M., Chen, S.J., Chen, Z., and Liu, T.X. (2010) Setdb2 restricts dorsal organizer territory and regulates left-right asymmetry through suppressing fgf8 activity. Proceedings of the National Academy of Sciences of the United States of America. 107(6):2521-2526
Dong, M., Fu, Y.F., Du, T.T., Jing, C.B., Fu, C.T., Chen, Y., Jin, Y., Deng, M., and Liu, T.X. (2009) Heritable and lineage-specific gene knockdown in zebrafish embryo. PLoS One. 4(7):e6125
Du, T.T., Fu, Y.F., Dong, M., Wang, L., Fan, H.B., Chen, Y., Jin, Y., Chen, S.J., Chen, Z., Deng, M., Huang, Q.H., and Liu, T.X. (2009) Experimental validation and complexity of miRNA-mRNA target interaction during zebrafish primitive erythropoiesis. Biochemical and Biophysical Research Communications. 381(4):688-693
Luo, G.R., Chen, Y., Li, X.P., Liu, T.X., and Le, W.D. (2008) Nr4a2 is essential for the differentiation of dopaminergic neurons during zebrafish embryogenesis. Molecular and cellular neurosciences. 39(2):202-210
Wang, L., Zhang, Y., Zhou, T., Fu, Y.F., Du, T.T., Jin, Y., Chen, Y., Ren, C.G., Peng, X.L., Deng, M., and Liu, T.X. (2008) Functional characterization of lmo2-Cre transgenic zebrafish. Developmental Dynamics : an official publication of the American Association of Anatomists. 237(8):2139-2146
Le, H.Y., Zhang, Y., Liu, H., Ma, L.H., Jin, Y., Huang, Q.H., Chen, Y., Deng, M., Chen, Z., Chen, S.J., and Liu, T. (2008) EENA promotes myeloid proliferation through stimulating ERK1/2 phosphorylation in zebrafish. The Journal of biological chemistry. 283(25):17652-17661
Sun, X.J., Xu, P.F., Zhou, T., Hu, M., Fu, C.T., Zhang, Y., Jin, Y., Chen, Y., Chen, S.J., Huang, Q.H., Liu, T.X., and Chen, Z. (2008) Genome-Wide Survey and Developmental Expression Mapping of Zebrafish SET Domain-Containing Genes. PLoS One. 3(1):e1499
Song, H.D., Sun, X.J., Deng, M., Zhang, G.W., Zhou, Y., Wu, X.Y., Sheng, Y., Chen, Y., Ruan, Z., Jiang, C.L., Fan, H.Y., Zon, L.I., Kanki, J.P., Liu, T.X., Look, A.T., and Chen, Z. (2004) Hematopoietic gene expression profile in zebrafish kidney marrow. Proceedings of the National Academy of Sciences of the United States of America. 101(46):16240-16245