Genomic Feature

oz30

ID
ZDB-ALT-210317-1
Name
oz30
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Amacher Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 3
Variants
Variant Type
Small Deletion
Variant Location
Chr 3: 32816338 - 32816357 (GRCz11) (1) Details
Nucleotide change
ACGGTGAAGTTGATTGGGCC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
20 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AAAATCACTAAATCTGCCCCTCATCTAGTGTACATCACCAAAGTGGAGTTGACATTTTGTTTAAAAATTAGGAGGTTAGAAATACTAATAATGAAATCTGCATGGGTGGATTGTTCACCATAGGATAAATACATGCACTCATCATGAGGACATTACTCTGATCTTACCTCCTCTGCGGTGAACCTGTCGCACTGAGTGGTCAAAAGCTCCTCAAGGCTGAAAGAGAGAGAAAGAGCAGCGCTCAGACATGGAAACCTTGATTGTGTCGTGTGTGCATAGAAATGAAGAGTCATTGAATATATAGACTTACAATTCCTTCTTGATGGATCCAGTGCCCTCAGGGTCCAGCACCTTGAAGGCAGACACGATGACGTCTTCGGGGTCAGCACCTTTCAGAGAAACAAAGCGCAGGTTACACTTACTGAAAACCAAAAGGAATAAAAGATAGAAAAAGTGACGTTTGCACACCCTTCAACTTCTCTCCGAACATGGTGAGGAAA
ACGGTGAAGTTGATTGGGCC/- GCTGGCTTCCTTGATCATGGCCTCCAGCTCCTCATTCTTCACATTCAGCTGGCCTGTAGAGAGATGAGGACGGTCAACACGGGATCATGGATATGTTTGTGAAGGACACAATTGAGAAAAGACGCACCCATTGAGGCCAACACGTCCCTAAGGTCGTCTTTGCTGATGATACCGTCTCTGTTCTGGTCAATGATTGTGAAAGCCTATTGTGTGCAAGACAGAAAAAAAGACAAGTGAGATTCCTGGAAACACATCATTAAGGTAATTCATCATATAAAATTCCAACGTTTATCTCTATCCTGACAGCAATGAAGCAAAGTGCCCTTTTCAATCACATGAAGCTCAAAGAGAGTTGCTTAATTTAAATAACGGCAGCTGCTGGCTCCTATCTGACCCCCACAGAGACCCTCGCTGATCCTTCTTTCCATCTGGGAGACGTGTTAAGTCAAACCCAACTGTACTGTCAGACATTCCAGAAGAGGCACTTGAGAAGACTGTAT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
mylpfaoz30/oz30 (AB)Homozygous♀+/- ♂+/-2 figures from Chong et al., 2020
mylpfaoz30/oz30; fb121Tg; fb122Tg; i104Tg (AB)ComplexFig. 4 from Chong et al., 2020
mylpfaoz30/oz30; i104Tg (AB)ComplexFig. 4 from Chong et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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