Genomic Feature
dw214a
- ID
- ZDB-ALT-200925-5
- Name
- dw214a
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Gallagher Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 9: 1668797 - 1668958 (GRCz11) (1) Details
- Nucleotide change
- CGTGAGGTGTTCGACTTCAGCTACCGGCAGAAGGAGGTGGAGCTGCGCA GGCGGAGGGAGCAGGAGGAGCAGGAGCTGCAGGAGCGTCTGCAGGAGCAGGAGAAGACAC TGCTGGCTCAGCTGCAGCTCGACGAGGAGACCGGAGAGTTCCTGCCGCGCAGC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 169 bp deleted (1)
- Transcript Consequence
- Inframe Deletion (1)
- Protein Consequence
- Amino Acid Deletion (1)
- Flanking Sequence
-
AAGTATGTTAACCACGCCCACTATATCTGACTGACCTAATCTGAGGATTTAGCTGAAAACAAAGAGGGAGTGCATTTTCAGATCTTAATTATTAGGCCAAACACTTGTTTCTTAATGACATGCACAGATGAATTGTTCATCATTAAACTAGCAATGTGAGCTGACAAAGTTAATATGGTTTGTTTTGATTTCATGGGGACTTTAAACTCTCCTCAAATGCCTTTAAAACACAAGCACAGGATAAAGTTTCACTCTGATATTGTTATACTTTGCAGTGACTCTACAAATCTCTTGTATTCTTAAATACTGTAATCCCAACTCAACATTGTGTATGCTGTGATGACTATTGCGCGCGCACACACACAGTGTGATATCCATGCTGAAGTGATATTATTGTGCAGCCCTAGTGTGTGATGCCTGACCTCTGATGTCTGTTTTCTCTGCAGGACATGGATCTGATCGATATCCTGTGGCGGCAGGATGTGGATCTGGGCGCGGGC
CGTGAGGTGTTCGACTTCAGCTACCGGCAGAAGGAGGTGGAGCTGCGCA GGCGGAGGGAGCAGGAGGAGCAGGAGCTGCAGGAGCGTCTGCAGGAGCAGGAGAAGACAC TGCTGGCTCAGCTGCAGCTCGACGAGGAGACCGGAGAGTTCCTGCCGCGCAGC/- ACACCGCTCACACACACACCTGAAGCAGACGGAGGAGGAGCGGGAGAAATCACACAGGTACACATGCACACACAGCAGACAATGTAGAACCCACACAGGTACACATACAAACAATTACACACACATGCACAAATAACACACAGATCTATCCTGTGAGATTTGACACAAATGCCCAAACATACACACACACAAACATACAGGAACACACACAAACAAAGCAGACAATACACACGTACATACATTCACAAGCGCACACACAGATGTACAAATACACACACTCACCCACACATGTGTATATATATTTACAGAAGCACACACGCACATAAATACACACATACATGTACATAAACACAGTTGCACGCACACACAAACACACACAAACAAATATACACAGATGTACAAATACACAAACTCACCCACCCACACACACATATTTATATATATAGAAGCACACACACACACACACATACATGTACCTAAACACAGTTACACGCACACAC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| nfe2l2adw214a/dw214a (EKW) | Homozygous | ♀+/- ♂+/- | 2 figures from Mills et al., 2019 | Fig. 1 from Mills et al., 2019 | |
| nfe2l2adw214a/+ (EKW) | Heterozygous | ♀+/- ♂+/- | Table 1 from Mills et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None