Genomic Feature

re08

ID
ZDB-ALT-200827-1
Name
re08
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
van Ham Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 1
Variants
Variant Type
Small Deletion
Variant Location
Chr 1: 51000236 - 51000272 (GRCz11) (1) Details
Nucleotide change
TGGAGAAGCTGTTGAGTACCGCCAAAACACCAGAGGC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
37 bp deleted (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CTAAGCCCAAGAAAAAATAAATGAATGAATGAATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAAAATGCTGCAAATTCAGCAGGAATAGTGCTTTTTAACATGTAATACAATTAAAATCTGTTAATTAAATTGTTAATAAGTGAAAAATATTAGGTTTTAACAAAATAAATGCAGCATTTATGACCTTAATATTCAGTTTGAATTATTCCAGACTTTTGACAGTCTGCCTGAATTATTTAAACAATACTCCAACTAATTTATCAAAACCAAAAATCACGGCAGAATAAAATGATCTAACTAAACAATCATCAGTATTCAAAGATGTCAGTAATATCCTGCTTTCCTGTGTGTGTTTTTTTCCATAGACCTGTATAGATCGAGCCCTAATGCGGGAATGGCGGAGTTTCAGGAGAAGCTGAGACTGCAGCATGAGAACTCCATGCACACAGAGC
TGGAGAAGCTGTTGAGTACCGCCAAAACACCAGAGGC/- CGAGGTAAAACAACAGTCCTTGCCAACATGTTCATGTGCTCCTTCTGTCCATGACTCCATGTGTAAACCATATACAGTTGAAGTCAGAATTATTTGCCCCCTTTGATTTTTTTTCTTTTTTAAATATTCCCCAAATGATGTTTAACAGATTCAGGAAATTTTCACAGTATGTCTGATAATATATTTTCTTCTGGAAAAAGTCCTATTTGTTTTATTTTGGCTCGAATAAAAGCAGTTTTTAATTTTTTACAAAATATTATTTTATGGTCAATATTATTAGCCCCTTTAAGCTATTTTTTTCCAATAATCTACAGAACAAACCATTGTTTTACAATAAATTGCCTAATTACCCTAACCTGCCTAGTTAACCTAATTATCCTAGTTAAGCCTTTAAAGGTCACTTTAAGCTGTATAAAAGTGTCTTGAAGAATATCTAGTCAAATATTATTTACTGTCATCATGGCAAAGATAAAATAAATCAGTTATTATAAATTTAAACA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
ugp2are08/re08; ugp2bre09/re09; re10TgComplexFig. 6 with image from Perenthaler et al., 2019Fig. 6 with image from Perenthaler et al., 2019
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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