Genomic Feature

zf3020

ID
ZDB-ALT-191121-2
Name
zf3020
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 10
Variants
Variant Type
Insertion
Variant Location
Chr 10: 36098226 - 36098227 (GRCz11) (1) Details
Nucleotide change
-/GAATAATACTG
Variant Notes
L544Efs_1
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
11 bp inserted in Exon 6 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AAAATCACCAGTGGCAGGGAAGCATTGTCTTTTAATTGACAAAATAGTCAATAGTGGAGAAAGAGCTAATATATTTGATTATTAAATTTGTTTTCTCATTTCTTGCAGAAGAAAGTGGCATGGCTGTTCAGTCCAGCAGTGAAATCCGTATTGCCACAGCTATATTCCCTGTGCTCAGCCTGCTTAACCACTCCTGCAGTCCAAACACAAGCATCTCCTTCACTACAGGATTTCAGCCTGACCCACATAATCAGTTGGGCTGTTCTGAAGGTCACTTTGACCATCCCAAGGGCTCTCGGTCTGGTGTGACGGTCACTGTACGTGCTTCAAAAGACCTCACTGCAGGACAGGAGATTCTGCACTGTTATGGTATTGTGTGATCATGGAAATTTTGATTTAGTTTTGATGGAGGCTCATGTAGGTTTGCTTTTATAATGTCATTATTTCATCACAGGCCCTCACCGTAGCAGAATGGAGGTGAAGGAGCGTCAGCGCCTCCTG
-/GAATAATACTG CTGGAGCAGTACTTTTTCCAGTGTGTATGTCAGGCCTGTCAGAGAGATCTGTCAGAAGGAAGCCCGAATGCAAAAGAACACACAGCACCAGGGATGAAGTGTGTGAAATGTGGAAAGCCTCTTCAGGTAAACATTTTCAGAAAGGTCTAACTCAGGGGTGCCCAAACTTTTTCATGTGAAGGGCCAAAAACCAAATATCATTGAGAGCTGTAAGCCGAAGGTAAATATATCAAACTATTACATTAAAGTTGTCATGGATAATTTCCAGGTTTTTACTTAATATTTCAAAATAAATAGAAAATATTACTTTAAATCATATTACCTAATGCAGTATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTGTAATTATAACTTATTACAACAAAAACATAAACAATTACATTTATAACAGTAGAGTTCAGTACTGAATACACTAGTCAAGCAGAATCTGCCTTTGCTTT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
smyd4zf3020/+; zf2036TgComplexFig. S2 with image from Xiao et al., 2018
smyd4zf3020/zf3020; zf2036TgComplex8 figures with image from Xiao et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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