Genomic Feature

co1000

ID
ZDB-ALT-190906-3
Name
co1000
Synonyms
  • Allele #2 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Artinger Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 1
Variants
Variant Type
Small Deletion
Variant Location
Chr 1: 12763977 - 12763986 (GRCz11) (1) Details
Nucleotide change
TTCTCGGTAC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
CCGCACATATCATGGACCGTTAGACAGCTATATGTAGAAAAAGTGTTCATTTTTCTGTTGTTGCAACAGCTCGCGTTCAGGATTTTATTTCAAACTGATCTCTCCACTTACTGAGCAAAAGAGTTGGGGAAAGATTTTGCTGCTCAGAATTAAGGATTGGGGCATCAGTAGGTTCTGCAATGTCTTGCTGTGACGCACGGACTACTAAATTCTGCTCTCTTTGAGAAAGCATTATATCAAATGGCTATAGCTCTTGCGCATATGGCGACATGGTTTCAGGCTGACACCGTACAACACAGGAGCTTTCGTGTTCGTTTGGGAAGTTGCACAGCGCATATGTTTTCGTGGACCAAAGCTATGGGTAATTCCTAAGCTGTGACTGGAGAAGAAGCGGTGTGAAGACAGAGCGAGGGAATAAAGAGGGGTGCACTTGTTGTTTGGAGATGATTTTGATATTTCTCTTTTTCTCAATCTTGGATGGAGGGCTATCGCAGCTGCAC
TTCTCGGTAC/- CGGAGGAGCAGGAGCGGGGGACGGTTGTGGGAAATATCGCCGAAGATCTGGGGCTGGACATCACCAAACTTTCCGCGCGCCGTTTCCAGACCGTGCCCAGCTCGCGCACGCCGTACCTGGAGGTCAACTTGGAGAACGGAGCGCTGGTGGTGAACGAGCGCATCGACCGAGAGGAGATATGTCGCCAGACCGTCCCGTGCCTCCTGCATCTCGAAGTGTTTTTGGAGAACCCGCTCGAGCTGTTTCGCGTCGAGATCGAGGTCATGGATATAAACGACAATCCACCGAGTTTCCCAGAGACTGACATCACCGTGGAGATCACCGAGAGCGCCACGCCGGGTACGCGTTTCCCGGTGGAGAACGCCTTCGACCCTGACGTTGGGACTAATGCCTTGAGCACATACGCCATCACCACGAACAACTACTTTTACTTGGACGTACAGACGCAGGGCGATGGCAACCGCTTCGCAGAGCTCGTGCTGGATAAACCCCTGGACCGA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
pcdh10aco1000/co1000Homozygous♀+/- ♂+/-3 figures with image from Williams et al., 20185 figures with image from Williams et al., 2018
pcdh10aco1000/co1000; vu234Tg; w47TgComplexFig. 4 with image from Williams et al., 2018
pcdh10aco1000/co1000 + MO2-pcdh10bComplexFig. 5 with image from Williams et al., 2018
pcdh10aco1000/co1000; pcdh10bco1009/co1009ComplexFig. 5 with image from Williams et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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