ZFIN ID: ZDB-GENE-020731-1

Mapping Details

Gene Name:	protocadherin 10a
Symbol:	pcdh10a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	1	14,156,545 - 14,191,116	GRCz12tu
NCBI Map Viewer	1	14,156,545 - 14,191,116	GRCz12tu
Ensembl	1	12,763,461 - 12,797,410	GRCz11
NCBI Map Viewer	1	12,763,436 - 12,797,552	GRCz11
UCSC	1	-	GRCz11
Vega	1	12,076,661 - 12,110,610	GRCv10

Mapped Clones containing pcdh10a
CH1073-140O1	Chr: 1 Details
CH1073-304L24	Chr: 1 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
co1000	1	12,763,977 - 12,763,986	GRCz11	DIRECT		Williams et al., 2018
sa32618	1	12,765,269	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	1	12,078,469	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	1	12,125,557	Zv9	DIRECT		Busch-Nentwich et al., 2013
co1000	1		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa32618	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	1		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
zko274b	1		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
1	23.7 cM	pcdh10a	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by pcdh10a
fc56b06 Chr: 1 Details

Genomic Feature co1000 is an allele of pcdh10a