Genomic Feature

fdu30

ID
ZDB-ALT-190906-1
Name
fdu30
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Ruilin Zhang Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 7
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 16554324 - 16554330 (GRCz11) (1) Details
Nucleotide change
ACCCATA/-
Variant Notes
The mutation eliminated the second LIM domain whereas the first LIM domain was  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AATTTATACAAAAAAAAAATATTCAAGGGAAAAAAATTTTGTTGAATTTGTGTAGTTTGTCATTTTTTGTTTTAATTTTGCATGAATTTAAATGTATTATCTTTCCATTTCTAAAGATGTTCGGTGACTAAAATATTATTTGAATAAATGTATTGGTTTAGTAAATCTATTTTGTTCAAATACACCAAAATATATGACCTATATTCACTGAGAAATGGTTAAAAATATTCATTTTCAAAATCGGGTGTAGTCAGTTATGCTGAGCACTGTATGTACTGTATCCTTCATAAAAATTGGCATCTCAGTGTAATCAATGTAAAATGATGTTTGCATATGGACATGCATTAAGGGTATAAATCTGTCCTTAAAACTTGGTAAAAGTCAGTTCATGCATAACAAAAACGTTCAACATTATGAGTGTATTTTGAGGACGTACTCTTGAGGCTGAAGTTCTTCATTATTGACCGGGTCAGAACTCAAAGCTCCAGCACCCTGGCCAT
ACCCATA/- ACCTTTCGGACCATATTTCTTGCCGTAGCAGGTTTTGCAGTATATCTCAGACTCATGTGCGGCAACTGTGGTGCTGTCCAAACCTTTACGACAAACCACTAAAAACAAACAAATCATGCATATATACATTTTTAAATGTTTACCAAATGATGTTAAACAGAGCAAGGAAATTTTCACAGTATGTATTATAATATTTTTTCTTCTGGAGAAATTCTTATTACTTTTATTTCAGCTAGAATAAAAGCCGTTTTAAATTTTTTTAAAGCCATTTTAAAGTCTAAATTATTAGCCCCTTTAAGCTATATGTTTTTTGATAGTCAACAGAACAAACCCATCATTATACAATAACTTGCCTAATTACCCTAACCTGCCTAGTTAACCTAATTAACCTAGTTAAGCCTTTAAATGTCACTAAGCTTTATAGAAGTTTCTTTAAATAATATTAACTGAATATTAGATATTTTTCCTGAATAAAAGCAGTTTTTTATTAATAAAAAATA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
csrp3fdu30/fdu30Homozygous♀-/- ♂-/-2 figures from Chang et al., 20193 figures from Chang et al., 2019
csrp3fdu30 + MO1-ilkComplexFig. 4 from Chang et al., 2019Fig. 4 from Chang et al., 2019
1 - 2 of 2
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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