Genomic Feature
tsu3d5i
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 8: 47151790 - 47151792 (GRCz11) (1) Details
- Nucleotide change
- CCC/GATGA
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp inserted / 3 bp deleted (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
AAGCATACTGATATTATACAAGAAAATTATCAAATTATCTGCTGCCGTAATTCACGACAGCGAGCATGTAAATGCAAGAAGCACGCTGCGTCTCGTATTTGCTGAAGCAGGCCGCGGGCTCGAGCACGCGTCATGGCGGTCTTCAATCCGCACGCGGATGTGATGGAACGCGACACGCGAGTTAACATTCAAACTGGGTGAAACCGTTTAACGTCTCAAGTTTAATGTACGTAAATCTTAACATGTGGTAAATAAACGGACAGCTCCAAAACAAAAATACCAGGCAGGACGCCACGGGTACAGAACACAAATTAAGTTGGTGACGGAATAACGACAGCACAGTCGCAGACAGCGTGGCCTTTCTTGAACTGACATACATTTTGTAACATAACTGAAATAAACCCTGGAGCGTTTAAGAAAATGTATTATTCCGAAACTTAAACGACCGCAGGCCAGGGGGGCTTTGGTTTCGCCGACAAGCTTACCGATGACCTTCTTAT
CCC/GATGA CCGCGGTAGCTGCGGCTGCCGGGCTGGACGGGCTCTCCGCGTCGGCGGCAGGCTGCGGCGGCTGTTGTGTCTCGGCCTCGCTGCTCATGTTGTTTTCTTGTTGGTAAAGCCGGCGGTGGCTCTCTAGTGTGTTTTCCCGGTGCTAGATGGTAACCTGGGCCGGCGGTGGTGGGGGCTGCTGCCTTCGGGCTCTCCGCTTTCCTTTCTCCGCTCCCGTTGCCGATCGAACTGGACGGACTGAGTAAAAATGCCGGACGATATTCTGTCACATCTCTCCACCCATTCCCCAATCTAATTGGTCGACGAACTTGCGATAAGTCAACGTCAGCTTTTTCGCCGACGCCCATTGGACACTTTTGCTATCATTCACATAAAAATAATTGTAGGGCTGACCGGGACTGGTTAAACAAATAATTAGCACCGCCTGCAAATCAAGACCCTATTTAACCTTCCAGACATACCGGCAGGTAGATATTTAACACACGCTAAAGGGAAACAAA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| ybx1tsu3d5i/tsu3d5i (TU) | Homozygous | Unknown | Fig. 2  from Sun et al., 2018 | ||
| ybx1tsu3d5i/+ (TU) | Heterozygous | ♀-/- ♂+/+ | 6 figures from Sun et al., 2018 | 4 figures from Sun et al., 2018 | |
| ybx1tsu3d5i/+; tsu29Tg (TU) | Complex | Fig. 1 from Sun et al., 2018 | |||
| ybx1tsu3d5i/+; tsu30Tg (TU) | Complex | Fig. 7 from Sun et al., 2018 | Fig. 7 from Sun et al., 2018 |
1 - 4 of 4
Show
Supplemental Information
- Genotyping protocol
- None
- Zhang, L., Chen, L., Chen, J., Shen, W., Meng, A. (2020) Mini-III RNase-based dual-color system for in vivo mRNA tracking. Development (Cambridge, England). 147(22):
- Sun, J., Yan, L., Shen, W., Meng, A. (2018) Maternal Ybx1 safeguards zebrafish oocyte maturation and maternal-to-zygotic transition by repressing global translation. Development (Cambridge, England). 145(19):
1 - 2 of 2
Show