Genomic Feature

sm15

ID
ZDB-ALT-181029-2
Name
sm15
Synonyms
  • smu5 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yiyue ZHANG Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 7
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 38657237 - 38657243 (GRCz11) (1) Details
Nucleotide change
TGGGAAA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 5 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
None
Sequences
Flanking Sequence
CTCGTGCTGGACGGTGCTGAAATACACACAGCCTTGCCGCTGGAGAGACACGACCTGACCTCCACCTATCCGCCCTAAATATGAATAGCAGCTGCGGATCACGCACAAACACACATCAGAAATCAGCGTGTATGTTTGTGCGTCACGAAAACAATATTGTTATACACAGGAAAATGACAGAAAATGCAAATATTTACCCAGATTCAGACTTTATGTTGAGATAGTTCCTCTCTCCAGTATGAGGCACAAAACGAATGCAGGAAACCGCCGAAAAGGATTGCAAGCCTTGTTCAATCACTGCTACTTCCCGTGGAGCTGTGTGGAAACAATATACGACTATTGAGCAGAATACGAGGTGCTAAAGAGAAAATGTGAAGATAAGTGTCATCGTCACTTACAGTACGCTCTAGATATCTGGTAAGGCACATAGACTAATCCATCTCTGCTTCTGTCCCATTTGCAGCCACGAGCTGTACATTGATCTGCATTCTGCAAACCTC
TGGGAAA/- GGCGATGTCTCCAAACAGGATTACTGGCCCATCTGTGTTCTCTCCTGTATGGTAGTGGTCAACAATAAAAATAAAGGTTTATCCTTGCTAATATTACTGGATTCATCACTTTTACTGCATTGACTAGAGCAAAATTATTAAGTTGTATTCATTTATTGAAATCAACTGTAGCAACGCTGGATTACTTCATCCAAACGCAATAGCACTGTCCTGTAAAGCTGCTTATACCTAAATTGAAATTATTTATATTTCTATAATAGTGAATTTATAACAAAATGATATAAAAATAACTGCCTGATATTTTTAAGTGAGATTTATAAATAATATTTCCATTTATGTTTGGTTTATTATTACAACTATGAAAATCTGAGGGTTCAAAAAAACTAAATTCAGAGAAAAGTTCTTGGCCTGGCACATTACTGATCAAACATTTAGTTTTGCATTAGAAAATGTACAAGATTTGACTTATGTTTTGTATTTGTGGCTATATCAGTGCAACA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
npsnsm15/sm15HomozygousUnknownFig. 3 with image from Di et al., 20174 figures with image from Di et al., 2017
npsnsm15/sm15Homozygous♀-/- ♂-/-Fig. 4 with image from Di et al., 2017
npsnsm15/+HeterozygousUnknown2 figures with image from Di et al., 2017
npsnsm15/sm15; i114TgComplexFig. 5 with image from Di et al., 2017Fig. 5 with image from Di et al., 2017
npsnsm15/sm15; sm13TgComplexFig. 6 with image from Di et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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