Genomic Feature

cq37

ID
ZDB-ALT-180815-1
Name
cq37
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
Lab of Origin
Lingfei Luo Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 3
Variants
Variant Type
Point Mutation
Variant Location
Chr 3: 36661001 (GRCz11) (1) Details
Nucleotide change
T/A
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
T>A at position 1670 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation: Leu>Stop at position 557 (1)
Sequences
Flanking Sequence
AAAATAACAGCCGTTCAATACAGGATGGCTGCTAAAAGGTTTAAGTTTTATAAATATTTATTTATACCACAGATTTCTGAAATGTTCATCAGTTTGAGGTGTTTGTAAAGCAGTAAGTTAAATAAATATTTTAATGTTTGTTTGTTTTTCTACAACATCTTCAATTTAGAAAGAAATGGTTATGTTATTTATCATGATGTGGACCAGTCCTATTTTGTGTAGAAATTCCCTTGTTTAGTAAATCTGTCAGCATAAGCCTGCACACTTTAGCTTGGGTGAGTGCCCTCATTTACAGATAGTTCTGTTTCAAAGTGGTTTTAATGTACGTCTGGCCCCTTTCCAGGCCTTAATCTGTCTGGTAGACAAAAAGACGGGGGACAAGAGCAAAACACGACCACGCTTTGTCAAGCAAGACCAGGTGTGCATTGCTCGTCTGAGAACAGCTGGGACCATCTGCCTTGAGACCTTCAAAGATTTCCCTCAGATGGGACGCTTCACCT
T/A ACGAGATGAAGGTGAGTGCATGTTATCACCAGTTGTGAATGCAAAACTTAAATTTCTTTTTTTATGTTTGAAAAAAAATCAATCAGCTGGTCAGAAATCTTTTCTTAAAAATAGTTTCAACCAGTCTCTGTTCAGGACTTGCATATAAACTGCAATGCAATAATTGTATAGTACAAAGTGCATAAACCAGAGGCCTGAAGACCTGAAAAGCCACATTGTAATGGCAGCTTGAACACCACACAGAAATGGCTGAACTCCTGTAGGATAAGACATTAGGCATTAAATTGTACAAAAATTGACCTTCATTTCTTTCATGCTTCTGCAATTTTTGTGGCATTTTCAATTTTAAATTAGTTTGAACAGAAAAGTGTTTTGTGTTTGGCTTGTTTTCATTATACTGCATGTTTAAGGCTGATTTATACTTGTGTCGAGTGATCGCAGTGACCCATGTGGCCTGCCTTGTGCATTGCCATGCATTCATACTTCTGCATGCTGTTTGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
gspt1lcq37/cq37Homozygous♀+/- ♂+/-Fig. 1 from Wang et al., 2017Fig. 4 from Wang et al., 2017
gspt1lcq37/cq37; s843TgComplex2 figures from Wang et al., 2017
gspt1lcq37/cq37; zf544TgComplexFig. 1 from Wang et al., 2017
gspt1lcq37/+; gspt1lcq38/+; s843TgComplexFig. 3 from Wang et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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