Genomic Feature

w128

ID
ZDB-ALT-170921-18
Name
w128
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
David Raible Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 18
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 22995150 - 22995153 (GRCz11) (1) Details
Nucleotide change
CACG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted from position 109 to 112 in Exon 2 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation: at position 53 (1)
Sequences
Flanking Sequence
AAGTTTTTATCCTTCTGTTCACCGCAGTTTCAGCGTTATGCTGTATCGGAAGCATCTTGACATAATGAAAGAAGTAGCAGTGAACATCAGCTTTTGGCATAATTGTTATACATATAGTTTACTTTTAATTCCAATTGATGATATCTCACTTTAAAAAGGCGCATCATGTTTTTGTGTAGCCTAAAAGTATGCTTTTTTAGTTTTTATTTGAGTAACCAAATTATTAGTTTACCTCAGGTCACACAGGCTTTATAAAATCCATTAAAAGCTGAAAACCAAAGTCAGAATGTGAAAAAAAATTATAGCCTATATATCAACCGACTTTCTCTACAGTTTGATTTAAAATGTTGTTCAAACATTAAAATAAATCTTGAAACTGAGCATTAAGAGACGTGTGTGACAAGTTACAAAAAAAATTGTTATATAGGGGTAATAACACTCTTCTGTGCCTTTTTCATCCCTGTTTACAGATTAAATACACCGGTTTCCGCGATCGGCCG
CACG/- AGGAAAGGCAGGCGCGCTTCCAGAACGCGTGCCGTGACGGCCGCTCAGAGATAGTGAGTACACGCACCTCACAGCACCGGACAATTACAACACTGACCCTGCGTTCATGCAGCCGACGCAGTATTTAAACACTGCCGTGAACATGCATCTCAAACTCTGTCACCCAAAAACCATCTGAATACTTCCTTATATTTTTTGAGCGCCAAAGCAACAAAGATAGCATTTATGATCCATATTGTATAATTGTTTAATGTGTTTAATTTACCCAGTTGTCAGAACTGTAAACAATTCAACAATGCGTAAAATGCCTGTCGGCTTTTAATTGTAATCAGAAATGCGTCTCACGGGTGCAGATGAACTCGGACGTGTCTAATTTACAGTCTGCTTAAAACAGGCAGAGCGTATTAAGAGTCTTTCTCCTATTTATTAGATCTAGTAGCCTAAAATATTTAGCCTTTTAAAATTTTAAAGTTAGCTATTGACTGAATATTTTAGAGTTA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
cbfbw128/w128 (AB)Homozygous♀+/- ♂+/-Fig. 9 from Gau et al., 20178 figures with image from Gau et al., 2017
cbfbw128/w128; a129Tg (AB)Complex3 figures with image from Gau et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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