Genomic Feature

sus101

ID
ZDB-ALT-170508-2
Name
sus101
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Chun-Feng Liu Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 17
Variants
Variant Type
Insertion
Variant Location
Chr 17: 23784494 - 23784495 (GRCz11) (1) Details
Nucleotide change
-/GTTA
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp inserted in Exon 3 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TCACGTGAAAGGTCAAATGTGGTCTCATACAGCTTGATAAATCGTCGCACTGCACTTTTTCGAGCAAATAAGTGTTAAACAGCGTTTCTAGCTGTCTAAATCTGATCTGTGGTTTTCTGAACAGGTTATGAACAAGTCGAATGAATACAATAATGATTAAAACAAACACAGAAGAGGCTCTAATGGTTTAAAAATGCTATTAAATACATTAAAAACCACCAGACTTCAATCAATAAAACATGTTAATGGTATCTTGTGCGCTTAAGACACATTCCTTAAAATTAATTAGCTTTAACATGTCGCCAATAAGGTAAAACTAGGGACTCATTATTTTTCCATTAAAACCAATGTAACTTCCATTTGAACCATTGAAAGAAATACAAATTCTTGAATGGTTTCTAATGTTTTTTTCAGCACGGTGGTTATGTTGTTTCCTCTATTTCATCTCTCTAGTGCCTATTATCCCAAGTTACCTGTACACGGTGGACGACGAGGCTGCTC
-/GTTA AGATGGTTAAGAATCACTCCATGACCCCTCTTTCTCCATCGAGCACCTTTCAGAGCATTGTGTCTTTGTATGACAACACCACACGTGTGACAGGCTTCAGCCCGCAGATGAGCACAGCTGGTCCAATGAGCCTGGCTCCTACTTTTGTGAGCCCTCAAAACCAGTCCGACTGTCCCAAAGCAGATGACCAGCTTCTGAACGAGAATGTGAAAGTGGGTCTGTTGTTTGCCTCTAAAGCAACAGTACAGCTAATCACTAACCCCTTCATAGGACCACTAACCAACAGGTACAGCCGCTAGTTTAACTTAAAAAAAAAAACACAGCAGTGTTTCTCTTAAAAGCAGGATGGGATTGCATGACATTTGTGTGTGTGTGTTGAGTGTAAATGGAGTGTAAGTAAGTTGAATATTGCTGTGCTATTCTGCTACAGCTCTATCTATTCAAGGATCAGCAGTAGTGTGATCACTCGTGCATGTGCCGTCATATCTTCACATGCTCAGA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
slc18a2sus101/sus101Homozygous♀+/- ♂+/-
slc18a2sus101/+HeterozygousUnknown2 figures from Wang et al., 2016
1 - 2 of 2
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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