Genomic Feature

hu10539

ID
ZDB-ALT-161128-2
Name
hu10539
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Schulte-Merker
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 15
Variants
Variant Type
Small Deletion
Variant Location
Chr 15: 16381879 - 16381888 (GRCz11) (1) Details
Nucleotide change
CGGACGGGCC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
GCCTGCCAAGGGTGGCTGCAAGACCCCAGATGCTGGAGGGCCAGCACAAGAGGCCTGTGGAATGGGTTGGGATTGAGAAAAGCCCTGGGAGTGCTGCAGGTTTACCGACTGTGCCATATCAGGCAAATGCCGTAGTCCTTGTGGAGCGGACAACTGCTGCTGCATGAGAGTCTGTTGGTGGTTTAGGGTGTGGTGTGGTACTGGCGGTTGGTGAGCCTGGCTCTGATGTAAAGCCTCCTGATGGGCCAGGCTCTGCTGTGGTTGTAAACTGCTCTTCTGCTGCAGGGATTGTGGATGGGCCTGCAAGGCCTGAGAGTGACCGAGACTCTTCTGGCCTAAAGGAGTCTGAAGATGTGGAACAGTGTGAGGAACATTTAAAGTGCTGGGATTGGCGTAAAGCCCACTGTGCGGGTTCATGATGAGCTTGGGGAGAAAACGGGCTCGGCCGCCTTCAATGTCCTTGAGGATCCCTTTGACAGGAACTTTGACTATGGCCAAGA
CGGACGGGCC/- GGTGTTGACCTGAGGTGGGTAGGGGCTGTAGCGCTGACTGGAGGTGTCGAGACCGTTGACAGTGCGGCGAATGTGTTTCCTCTGAGGTACTTTTACACTATTGGGGAAGATTTTTATAGTCAGTGGGTTATTGGCAACTTTCTTAGCATAGGCATCCAATTCTGCTGGGGTGGGATAGTGTGCTGATCTCATCCTCTGTGTAGTGTCCCCTGTGAGAAAGAGAAGGCCAAACATGAAGAATAATACAAAAAATGTGGCGCTCATATGATAGCACATTACTGCTTATCAGGGCTCCTGCGGAGTTAGAGCATCTGTTTCACTAACAAAAGGATATCTAGGTCAAACATGCATGTAGTTTAATCAGAACCAAGCTTATTTCAGTTAAAGGCTGCTTACATTTCTGAAGTCCAGTGTTCATCTGCGTGTGCGAGAGAAGCTGGAGGGAGGGGTTTGATACCGGCAGACAGGCCAGCATGTCACAATGAGACTAATGCAACATT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
fam222bbhu10539/hu10539; fam222bahu10755/hu10755; s843TgComplexFig. 3 from Spiegler et al., 2016Fig. 3 from Spiegler et al., 2016
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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