Genomic Feature
gd5
- ID
- ZDB-ALT-161121-6
- Name
- gd5
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Jian Zhang Laboratory
- Current Source
- China Zebrafish Resource Center (CZRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 20: 23426317 - 23426318 (GRCz11) (1) Details
- Nucleotide change
- AT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 2 bp deleted (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
CAGCTTCTCTGCGCTGTCAACCGTCTCTGTGACCTCGAGATCCGTGTCCTCCTCTTCTTCACCCTCCTCTCTGAAGAGGGACACTAGTCTCCGGGATTCTACTGGGGAGTAAACGGCCTGGGTGCGCGGGAACCGGACACCACCGCTGCTGACGGGACTCCCAGGGGTCTGGACCTCCTGCCGCCGCCGGCGCAGGGCATCGCGTTTGCGTGCCAGAAGCGTCCGCGGCCCCAGAGAGCACTGGATAGACGCGTCGGTCTTCGGGTTGACCTGAACCCCGACGTCTTTGGTGTTGGCCTTCCTCAGACGCGGGGTGAGATTTGGGTTGATCTGAGACAAGATGGACTTCAGCTGCGCCCTGTGGTGATTATCAAAGTAGGTCTCGCCCTCACCGTAGTTGGTGAAGTAAGCTTTCTGTCTCCAGCCCTTGAATTTGGGGTATTTGTAGTAATAAGGGTTGTAAGAGGAGTAAAGATAGTTATCGACTGTCTCGTTTCCAT
AT/- GTAGCCATTTTTCGCTTAGCCGGCTGGCAAGCGGACTGTAGCGGTTTAAGTAACGTTAGATGAACAGGGTAGATTGAGCTCAGGTGTCTAATTAAGAACAATTAATACGATTTTCGAGGTTTGGGAAAGCTAAAAAAAATGTAGGACAGTCTTGAAAAGCAGTTGAAATGTGTTTGTGAGATGTGAAACCTTTGTTTAAGAACATACATAACTCGTTTTTTAGTAAACGAGCCATGTACCAACTTCCAAAACTCAGTTTAACCAGGTGGTTTGTTGTTAGTCTGTGAATGTCTGTACATTTTTACCAGCGAGTCATAGACATTTTCATCCTACAATAATTATTTGTTTTTCTCAGTGGTGTAAAGTAACATTACAAATACTTAAATTACTGTAATTGTGTAATTTTTCTCAGGAATTATAATTTACTCGTTTTAAAAATGTGTATTAAACTTTCCCTTGAGTTCATTTTTAGTGCTGTATTGGTACTTTTACTCCACTAC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| zar1gd5/gd5 (TU) | Homozygous | ♀+/- ♂-/- | Fig. 3  from Miao et al., 2017 | ||
| zar1gd5/gd5 (TU) | Homozygous | ♀+/- ♂+/- | 5 figures from Miao et al., 2017 | 4 figures from Miao et al., 2017 | |
| zar1gd5/+ (TU) | Heterozygous | Unknown | Fig. 5 from Miao et al., 2017 | 3 figures from Miao et al., 2017 | |
| zar1gd5/gd5; gd14Tg | Complex | Fig. 2 from Miao et al., 2017 | |||
| tp53zdf1/+; zar1gd5/gd5 | Complex | Fig. 4 from Miao et al., 2017 | |||
| tp53zdf1/zdf1; zar1gd5/gd5 | Complex | Fig. 4 from Miao et al., 2017 |
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Supplemental Information
- Genotyping protocol
- None