Genomic Feature

stl14

ID
ZDB-ALT-160202-3
Name
stl14
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Monk Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 7
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 28676402 - 28676427 (GRCz11) (1) Details
Nucleotide change
GTTCACTTCATTGTCTAGGGAGAAAC/-
Variant Notes
TALENs were designed to cleave zebrafish gpr56 genomic sequences between exons  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
26 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
CAGACACAGACAAGACAAAAAACAACCTGGTGAGAATCACAATTATTTTTTTGACAGTGTAGTGAACTCCAGGTCACTGAATTCACACTTACCTGCGTTTGCAGAGCCAGTAGAAGAGCACCAAACAGCTCACCAAGGACACAGCACAGCCCACTGCGGTAATGAACGTCAGAGCCTTTAGATGGCGGACTGTACTCTTCTGCTCTACTTGCTGGAGCATCAAAGAGAAAGAGACAAGGTATGTATCATTTCATATTCATGCTGTAATCAATTACCGCACTGCCTGATTTGATATGCATATTTTCAATGATGAGGGAAGTACCTTTTATTCATAAAGTTTGGCTTTGCTACCAGCTATAAGTACAAAAACAAACATTTAATTTTCCTAATCTGCTAATCCTGCTACTCACCACAAGAATAGCAAAGTATGTGAGATGATTGCAGTGGCATTCTGTCTGTTCTTCGTTGATTTTAACTGTATCGCAGCCATCATCTTTCCA
GTTCACTTCATTGTCTAGGGAGAAAC/- ACATTAGAAGAACAATTAGTAATTGTGCTGATGCCTAATGCTGACTGATGATGTGCATGAACATGACGACGGGAGCAGACCTTGTTTTGTATCCCATGAAACACATCTTCCTGAGCTGTCAGGCTGTGGAAGGAAACAGAAGAGGATTGGGATATCGGTTGTTAAAATAGAGACTGCATTCAGTCAGAAATGGTCTCAGAATCACAGGAAGCTTAGGGAAAGCTTTAAATGTCAGGCCCTGCCAGTGTGTTAATAGATTTGAATAAATAACCACCAAACCCCTTAATCTGTTTATTCAAAGCAGATTTCTCTATAAAAAGCAGCAGTCAGTAATACAATAAGAGTGAAAATTGTAAATACATAATTTAACTTGCTTAAAACAATAGCCAACAATACAGTAATTGAATCAAGTAATCAAATCGGATCACATTTTTTATCAAGAGTGTATATGTATGAAATAATTGGTGCTTTGACTATTGAATTATTAAAAAATAATGCAC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
adgrg1stl14/stl14 (AB)Homozygous♀+/- ♂+/-Fig. 3 from Ackerman et al., 2015Fig. 2 from Ackerman et al., 2015
1 - 1 of 1
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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