Genomic Feature
s105
- ID
- ZDB-ALT-090820-1
- Name
- s105
- Synonyms
-
- creature from the black lagoon (cbl) (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation (1)
- Protocol
- adult males treated with ENU
- Lab of Origin
- Baier Lab
- Current Source
- European Zebrafish Resource Center (EZRC) ( order this )
- Other Pages
Notes
| Comment | Citation |
|---|---|
| Small retina, mitotic defects caused due to loss of condesin complex. A C-to-T ... | ZFIN Staff |
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 1: 23563772 (GRCz11) (1) Details
- Nucleotide change
- C/T
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- C>T (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation: Gln>Stop at position 493 (1)
- Flanking Sequence
-
TTAATTAATTGCATCTAAAGGTAAAATGTTTTAACCTTCTCAACTACTGTTTAGGAAGCGCATGGTAGCAGTGCTGCAGGAGATACTTGTGATGCCCAACACACCTGTTTCTCTGATTGGTCTGCTAGTGGAGAAACTTGTCAACATTTTGCGAGATGATGCCCAGAAAATTCAGATGGTGAGTCCTTGTTGAACAACATATTACTTCTGAAAAATCTTCTGTTTGTGAAAGAATGAGGTTTAATCAGTATATTTCTTTGAGATTGACCATGTAGTTTTTCTTGAATGTGCCGACATATTCAAAATTGACCCTAATTGGGTGCTAAAAAGCTGAATAAATAGTTTTTCATGCTTAAAATAAGTTTAATCATTGGCTGACAAATAAATGTAATTGGTTGACTGTGCTATATTTTCTTCAGGTTGCTGAAATAATCTCTGATGTGAGGGAGCCTATTTTCCCCATCTCTGAGCCAGTGGATGAGAATGAGAAACGCAGAAAA
C/T AAGTCAGAGTGAGTTATATTTATAAATCACTGGTGCCTAATGTCATAAATCGATTGCATTCATCTTGATTTAAAAATGTTTTTTGGTAGCTGGCTGAGGTGCGAGTACAGATAATGGAGGCCAAACAGACTCTAGAAGACTGCATCAGCTGTCAGGACTTTAGCCGTGCAGCTGAGCTAAAAGACTCCATCTCTCAACTGGAGGAGCTCAAGAACCAGCTTACCCTGGAGGTTTCACAGCCAGCTGAAAATGTCAAGGAACAGCGTATAGAGAAGGTACAAAATTTACAAGCACATACGTGCATGTGTGTATATGTAGGTACATTAATTTCATCAACTACATTTTTAATTGAGTAATATTTAAACTAATGGCAACAGTTAATTACATTTCTGAATGGTCATGCAGTGCTGAAGACTAGCTTTTACCTTTGTCACAATGGGAGTAAAGTACATAACAAAAAAAATTGATGTTTTAATAAGTGTTTATAATTTTCATAACTG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| ncapgs105/s105 (TL) | Homozygous | ♀+/- ♂+/- | 3 figures  from Seipold et al., 2009 | 2 figures from Seipold et al., 2009 | |
| ncapgs105/+ (AB) | Heterozygous | Unknown | |||
| ncapgs105/s105; kca66Tg; kca6Tg | Complex | Fig. 4 from Seipold et al., 2009 | |||
| ncapgs105/s105 + MO4-tp53 (TL) | Complex | Fig. 3 from Seipold et al., 2009 |
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Supplemental Information
- Genotyping protocol
- None