ZFIN ID: ZDB-GENE-990415-33

Gene Name:chordin
Gene Symbol: chd

Previous Names: chordino(1) , din, dino (din)(1) , dino

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GENE EXPRESSION:(current status)

All expression data:	95 figure(s) from 68 publications
Wild Type Stages, Structures:	Cleavage:8-cell (1.25h-1.50h) to Larval:Days 7-13 (168.00h-14d, 4.5mm, 8 teeth)
	adaxial cell, anal fin ... (all 38)
Curated microarray expression:	GEO  (1)

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MUTANTS AND TARGETED KNOCKDOWNS:

Mutant line(s):   26 genotypes
Allele(s):   b215, c4, hi2293Tg, kt440, m52 ... (all 10)

Phenotype: (current status)

Data:	26 figures from 14 publications
Observed in:	brain, caudal fin, cell death, dorsal/ventral pattern formation, embryonic hemopoiesis ... (all 35)

Knockdown reagents: MO1-chd (1) ,   MO2-chd (1)

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GENE PRODUCTS:

Gene Ontology

Ontology	GO Term
Biological Process	anterior/posterior axis specification (more)
Cellular Component	extracellular region

All GO Terms (14)

Protein Families, Domains and Sites:

InterPro:IPR001007 (1) InterPro:IPR010895 (1) InterPro:IPR016353 (1)

PROSITE:PS01208 (1) PROSITE:PS50184 (1) PROSITE:PS50933 (1)

Pfam:PF00093 (1) Pfam:PF07452 (1)

Gene Product Description

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SEGMENT (CLONE AND PROBE) RELATIONSHIPS:

chd Encodes

[cDNA] MGC:193864 (1)    (order this)

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SEQUENCE INFORMATION:

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_130973 (1)	3178 bp	- Select Tool - ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Polypeptide	UniProtKB:B3DH08 (1)	940 aa	- Select Tool - ZFIN BLAST Ensembl SIB BLAST
Sequence Clusters	UniGene:75804 (1)
All Sequence Information (10)

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OTHER  chd  GENE / MARKER PAGES:

Entrez Gene:30161 (1)

Ensembl(Zv8):ENSDARG00000006110 (1)

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MAPPING INFORMATION:

LG:  15  Details

View Map: Merged  Individual Panels

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ORTHOLOGY:

				Evidence
Species	Symbol	Chromosome (Position)	Accession #	AA	CL
Zebrafish	chd	15
Human	CHRD	3 (q27)	OMIM:603475 Entrez Gene:8646
Mouse	Chrd	16 (14.00 cM)	MGI:1313268 Entrez Gene:12667
Orthology Details

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CITATIONS   (184)