Gene
bicc1a
- ID
- ZDB-GENE-101223-3
- Name
- BicC family RNA binding protein 1a
- Symbol
- bicc1a Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Description
- Predicted to have RNA binding activity. Human ortholog(s) of this gene implicated in diffuse cystic renal dysplasia. Is expressed in midbrain hindbrain boundary and pronephric duct. Orthologous to human BICC1 (BicC family RNA binding protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
diffuse cystic renal dysplasia | Alliance | {Renal dysplasia, cystic, susceptibility to} | 601331 |
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR001660 | Sterile alpha motif domain |
Domain | IPR004087 | K Homology domain |
Domain | IPR004088 | K Homology domain, type 1 |
Domain | IPR037974 | BICC1, SAM domain |
Domain | IPR047549 | BICC1, first type I KH domain |
Domain | IPR047553 | BICC1, third type I KH domain |
Domain | IPR047554 | BICC1, second type I KH |
Homologous_superfamily | IPR013761 | Sterile alpha motif/pointed domain superfamily |
Homologous_superfamily | IPR036612 | K Homology domain, type 1 superfamily |
Domain Details Per Protein
Protein | Length | BICC1, first type I KH domain | BICC1, SAM domain | BICC1, second type I KH | BICC1, third type I KH domain | K Homology domain | K Homology domain, type 1 | K Homology domain, type 1 superfamily | Sterile alpha motif domain | Sterile alpha motif/pointed domain superfamily |
---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M3AIX6
|
954 | |||||||||
UniProtKB:A0A8M9PP15
|
990 | |||||||||
UniProtKB:X1WGP5
|
955 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
bicc1a-201
(1)
|
Havana | 5627 nt | |
mRNA |
bicc1a-202
(1)
|
Ensembl | 1946 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Comparative Orthology
- Alliance