ZFIN ID: ZDB-GENE-090918-1

Gene Name:neuroligin 1
Gene Symbol: nlgn1

Nomenclature History

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GENE EXPRESSION:(current status)

All expression data:	7 figure(s) from 2 publications
Wild Type Stages, Structures:	Cleavage:2-cell (0.75h-1.00h) to Adult (90d-730d, breeding adult)
	brain, corpus mamillare ... (all 31)

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MUTANTS AND TARGETED KNOCKDOWNS:

Mutant line(s):   3 genotypes
Allele(s):   fh309, fh310, unrec_nlgn1

Phenotype: (current status)

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GENE PRODUCTS:

Gene Ontology

Ontology	GO Term
Biological Process	cell adhesion
Cellular Component	membrane

All GO Terms (2)

Protein Families, Domains and Sites:

InterPro:IPR000460 (1) InterPro:IPR002018 (1) InterPro:IPR019819 (1)

PROSITE:PS00941 (1)

Pfam:PF00135 (1)

Gene Product Description

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SEGMENT (CLONE AND PROBE) RELATIONSHIPS:

nlgn1 Contained in

[BAC] CH211-119C22 (1)    (order this)

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SEQUENCE INFORMATION:

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_001142265 (1)	2544 bp	- Select Tool - ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX005472 (1)	158170 bp	- Select Tool - MegaBLAST Ensembl
Polypeptide	UniProtKB:D2X2F9 (1)	867 aa	- Select Tool - ZFIN BLAST Ensembl SIB BLAST
Sequence Clusters	UniGene:86013 (1)
All Sequence Information (13)

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OTHER  nlgn1  GENE / MARKER PAGES:

Entrez Gene:100002610 (1)

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MAPPING INFORMATION:

LG:  11  Details

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ORTHOLOGY:

				Evidence
Species	Symbol	Chromosome (Position)	Accession #	AA	CL
Zebrafish	nlgn1	11
Human	NLGN1	3 (q26.31)	OMIM:600568 Entrez Gene:22871
Mouse	Nlgn1	Unknown	MGI:2179435 Entrez Gene:192167
Orthology Details

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CITATIONS   (9)