Gene

ints5

ID
ZDB-GENE-090908-2
Name
integrator complex subunit 5
Symbol
ints5 Nomenclature History
Previous Names
  • zmp:0000001187
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Acts upstream of or within regulation of RNA splicing. Predicted to be part of integrator complex. Orthologous to human INTS5 (integrator complex subunit 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
5 figures from Tao et al., 2009
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa19097Allele with one point mutationUnknownPremature StopENU
sa22540Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
sa35755Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-ints5N/ATao et al., 2009
MO2-ints5N/ATao et al., 2009
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Human Disease
Associated With ints5 Human Ortholog
No data available
Associated With ints5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR029444 Integrator complex subunit 5, C-terminal
Domain IPR029445 Integrator complex subunit 5, N-terminal
Family IPR040316 Integrator complex subunit 5
Homologous_superfamily IPR016024 Armadillo-type fold
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Domain Details Per Protein
Protein Additional Resources Length Armadillo-type fold Integrator complex subunit 5 Integrator complex subunit 5, C-terminal Integrator complex subunit 5, N-terminal
UniProtKB:A0A0R4IY96 InterPro 1023
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 14
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ints5-201 (1)
Ensembl
Ensembl 3,899 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-276I12ZFIN Curated Data
EncodesESTwz13170
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    Sequences
    Type Accession # Sequence Length (nt/aa) Analysis
    RNARefSeq:XM_687970 (1)4074 nt
    ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
    GenomicGenBank:CR383676 (1)164241 nt
    MegaBLASTEnsembl
    PolypeptideUniProtKB:A0A0R4IY96 (1)1023 aa
    ZFIN BLASTSIB BLASTEnsembl Protein Blast
    Orthology
    Comparative Orthology
    Alliance
    Species Symbol Chromosome Accession # Evidence
    HumanINTS511
    Conserved genome location (synteny) (1)
    Amino acid sequence comparison (1)
    MouseInts519
    Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Citations
    TSV
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