ZFIN is now using GRCz12tu for Genomic Data
Gene
rab11fip5a
- ID
- ZDB-GENE-090313-206
- Name
- RAB11 family interacting protein 5a (class I)
- Symbol
- rab11fip5a Nomenclature History
- Previous Names
-
- rab11fip5
- si:dkey-187a3.1
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable small GTPase binding activity. Acts upstream of or within digestive tract development; microvillus organization; and terminal web assembly. Predicted to be located in membrane. Predicted to be active in cytoplasmic vesicle and mitochondrion. Is expressed in intestine; notochord; and spinal cord. Orthologous to human RAB11FIP5 (RAB11 family interacting protein 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Jewett et al., 2020
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Jewett et al., 2020
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | C2 domain | C2 domain superfamily | FIP-RBD, C-terminal domain superfamily | Rab11-family interacting protein class I | Rab-binding domain FIP-RBD |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AYZ9 | InterPro | 650 | |||||
| UniProtKB:A0A8M3BEJ7 | InterPro | 554 | |||||
| UniProtKB:A0A8M9PYF8 | InterPro | 532 | |||||
| UniProtKB:A0A8M3B546 | InterPro | 1615 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rab11fip5a-201
(1)
|
Ensembl | 2,100 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers