Gene

ddx43

ID
ZDB-GENE-080204-77
Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Symbol
ddx43 Nomenclature History
Previous Names
  • zgc:174910
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Predicted to have RNA binding activity and RNA helicase activity. Predicted to localize to cytoplasm; nucleus; and ribonucleoprotein complex. Orthologous to several human genes including DDX43 (DEAD-box helicase 43).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ddx43 Human Ortholog
No data available
Associated With ddx43 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site
Domain IPR001650 Helicase, C-terminal domain-like
Domain IPR004087 K Homology domain
Domain IPR004088 K Homology domain, type 1
Domain IPR011545 DEAD/DEAH box helicase domain
Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
Domain IPR014014 RNA helicase, DEAD-box type, Q motif
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily IPR036612 K Homology domain, type 1 superfamily
Domain Details Per Protein
Protein Length ATP-dependent RNA helicase DEAD-box, conserved site DEAD/DEAH box helicase domain Helicase, C-terminal domain-like Helicase superfamily 1/2, ATP-binding domain K Homology domain K Homology domain, type 1 K Homology domain, type 1 superfamily P-loop containing nucleoside triphosphate hydrolase RNA helicase, DEAD-box type, Q motif
UniProtKB:B8A609 719
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ddx43-201 (1) Ensembl 1,576 nt
mRNA ddx43-202 (1) Ensembl 2,478 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations